Mercurial > repos > iuc > package_python_2_7_biopython_1_66
diff tool_dependencies.xml @ 0:907c57486667 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7_biopython_1_66 commit b6b472025045b890c456737d93ed996dd2204186
| author | iuc |
|---|---|
| date | Thu, 03 Dec 2015 16:40:06 -0500 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Thu Dec 03 16:40:06 2015 -0500 @@ -0,0 +1,30 @@ +<?xml version="1.0"?> +<tool_dependency> + <package name="python" version="2.7.10"> + <repository changeset_revision="59d69069d35d" name="package_python_2_7_10" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + </package> + <package name="numpy" version="1.9"> + <repository changeset_revision="f9289486f06d" name="package_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> + </package> + <package name="biopython" version="1.66"> + <install version="1.0"> + <actions> + <action type="setup_python_environment"> + <repository changeset_revision="59d69069d35d" name="package_python_2_7_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> + <package name="python" version="2.7.10" /> + </repository> + <repository changeset_revision="f9289486f06d" name="package_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> + <package name="numpy" version="1.9" /> + </repository> + <package md5sum="b131708f954d93a2cd83fa8bd9c4cfba">https://github.com/biopython/biopython/archive/biopython-166.tar.gz</package> + </action> + </actions> + </install> + <readme> +This Galaxy Tool Shed package installs Biopython from source, having +first installed NumPy which is a build time depencency. This requires +and assumes a standard C compiler is already installed, along with +the Python header files. + </readme> + </package> +</tool_dependency>