Mercurial > repos > iuc > package_python_2_7

comparison tool_dependencies.xml @ 43:9aeb3401b7b4 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7 commit 80abc96e451fb55175aedf74bf90a9196172d4d2-dirty
author iuc
date Fri, 04 Sep 2015 08:48:12 -0400
parents 6c8e368fd983
children 5a35bc94e860
comparison
equal deleted inserted replaced
42:6c8e368fd983 43:9aeb3401b7b4
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="zlib" version="1.2.8"> 3 <package name="zlib" version="1.2.8">
4 <repository changeset_revision="03abe628fbe8" name="package_zlib_1_2_8" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="03abe628fbe8" name="package_zlib_1_2_8" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6 <package name="readline" version="6.3"> 6 <package name="readline" version="6.2">
7 <repository changeset_revision="40f8ebe365e9" name="package_readline_6_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="93fad0d5cab9" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
8 </package> 8 </package>
9 <package name="bzlib" version="1.0.6"> 9 <package name="bzlib" version="1.0.6">
10 <repository changeset_revision="6ebf4fdf5359" name="package_bzlib_1_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 10 <repository changeset_revision="6ebf4fdf5359" name="package_bzlib_1_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
11 </package> 11 </package>
12 <package name="xz" version="5.0.5"> 12 <package name="xz" version="5.0.5">
16 <repository changeset_revision="9ba893c2353f" name="package_sqlite_3_8_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 16 <repository changeset_revision="9ba893c2353f" name="package_sqlite_3_8_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
17 </package> 17 </package>
18 <package name="gdbm" version="1.11"> 18 <package name="gdbm" version="1.11">
19 <repository changeset_revision="77ea468f199e" name="package_gdbm_1_11" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 19 <repository changeset_revision="77ea468f199e" name="package_gdbm_1_11" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
20 </package> 20 </package>
21 <package name="ncurses" version="6.0"> 21 <package name="ncurses" version="5.9">
22 <repository changeset_revision="9331b44bf167" name="package_ncurses_6_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 22 <repository changeset_revision="387c0609c0b7" name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
23 </package> 23 </package>
24 <package name="python" version="2.7"> 24 <package name="python" version="2.7">
25 <install version="1.0"> 25 <install version="1.0">
26 <actions> 26 <actions>
27 <action type="download_by_url">https://www.python.org/ftp/python/2.7.10/Python-2.7.10.tgz</action> 27 <action type="download_by_url">https://www.python.org/ftp/python/2.7.10/Python-2.7.10.tgz</action>
28 28
29 <action type="set_environment_for_install"> 29 <action type="set_environment_for_install">
30 <repository changeset_revision="03abe628fbe8" name="package_zlib_1_2_8" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 30 <repository changeset_revision="03abe628fbe8" name="package_zlib_1_2_8" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
31 <package name="zlib" version="1.2.8" /> 31 <package name="zlib" version="1.2.8" />
32 </repository> 32 </repository>
33 <repository changeset_revision="40f8ebe365e9" name="package_readline_6_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 33 <repository changeset_revision="93fad0d5cab9" name="package_readline_6_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
34 <package name="readline" version="6.3" /> 34 <package name="readline" version="6.2" />
35 </repository> 35 </repository>
36 <repository changeset_revision="6ebf4fdf5359" name="package_bzlib_1_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 36 <repository changeset_revision="6ebf4fdf5359" name="package_bzlib_1_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
37 <package name="bzlib" version="1.0.6" /> 37 <package name="bzlib" version="1.0.6" />
38 </repository> 38 </repository>
39 <repository changeset_revision="c2168b2cb541" name="package_xz_5_0_5" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 39 <repository changeset_revision="c2168b2cb541" name="package_xz_5_0_5" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
43 <package name="sqlite" version="3.8.3" /> 43 <package name="sqlite" version="3.8.3" />
44 </repository> 44 </repository>
45 <repository changeset_revision="77ea468f199e" name="package_gdbm_1_11" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 45 <repository changeset_revision="77ea468f199e" name="package_gdbm_1_11" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
46 <package name="gdbm" version="1.11" /> 46 <package name="gdbm" version="1.11" />
47 </repository> 47 </repository>
48 <repository changeset_revision="9331b44bf167" name="package_ncurses_6_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 48 <repository changeset_revision="387c0609c0b7" name="package_ncurses_5_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
49 <package name="ncurses" version="6.0" /> 49 <package name="ncurses" version="5.9" />
50 </repository> 50 </repository>
51 </action> 51 </action>
52 <!-- by default python is not looking af LD_INCLUDE_PATH and Co. --> 52 <!-- by default python is not looking af LD_INCLUDE_PATH and Co. -->
53 <action type="shell_command">sed -i.bak -e "s/if host_platform == 'atheos':/if True:/g" setup.py</action> 53 <action type="shell_command">sed -i.bak -e "s/if host_platform == 'atheos':/if True:/g" setup.py</action>
54 54
55 <action type="shell_command">./configure --prefix $INSTALL_DIR &amp;&amp; make CFLAGS=-fPIC &amp;&amp; make install</action> 55 <action type="autoconf" />
56 <action type="download_file">https://bitbucket.org/pypa/setuptools/get/6.1.tar.bz2</action> 56 <!--action type="download_file">https://bitbucket.org/pypa/setuptools/get/6.1.tar.bz2</action>
57 <action type="shell_command">tar -xjf 6.1.tar.bz2</action> 57 <action type="shell_command">tar -xjf 6.1.tar.bz2</action>
58 <action type="change_directory">pypa-setuptools-7ea80190d494</action> 58 <action type="change_directory">pypa-setuptools-7ea80190d494</action-->
59 <action type="download_file">https://bitbucket.org/pypa/setuptools/get/18.2.tar.bz2</action>
60 <action type="shell_command">tar -xjf 18.2.tar.bz2</action>
61 <action type="change_directory">pypa-setuptools-1a981f2e5031</action>
62
63
59 64
60 <action type="shell_command"> 65 <action type="shell_command">
61 export PATH=$PATH:$INSTALL_DIR/bin &amp;&amp; 66 export PATH=$PATH:$INSTALL_DIR/bin &amp;&amp;
62 export PYTHONHOME=$INSTALL_DIR &amp;&amp; 67 export PYTHONHOME=$INSTALL_DIR &amp;&amp;
63 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR &amp;&amp; 68 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR &amp;&amp;