Mercurial > repos > iuc > package_python_2_7

comparison tool_dependencies.xml @ 22:25b20b323706 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7 commit 90f0980ded867989e4e3696170d3a2a373aa3197
author iuc
date Sun, 17 May 2015 22:44:21 -0400
parents 55bebb0e06ec
children 00d2c3e43807
comparison
equal deleted inserted replaced
21:55bebb0e06ec 22:25b20b323706
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="zlib" version="1.2.8"> 3 <package name="zlib" version="1.2.8">
4 <repository changeset_revision="03abe628fbe8" name="package_zlib_1_2_8" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="03abe628fbe8" name="package_zlib_1_2_8" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6
6 <package name="readline" version="6.2"> 7 <package name="readline" version="6.2">
7 <repository changeset_revision="4e4f3dc94efa" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 8 <repository changeset_revision="4e4f3dc94efa" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
8 </package> 9 </package>
10
9 <package name="bzlib" version="1.0.6"> 11 <package name="bzlib" version="1.0.6">
10 <repository changeset_revision="087298adb1fa" name="package_bzlib_1_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 12 <repository changeset_revision="087298adb1fa" name="package_bzlib_1_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
11 </package> 13 </package>
14
12 <package name="xz" version="5.0.5"> 15 <package name="xz" version="5.0.5">
13 <repository changeset_revision="6554cb54e83b" name="package_xz_5_0_5" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 16 <repository changeset_revision="6554cb54e83b" name="package_xz_5_0_5" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
14 </package> 17 </package>
18
19 <package name="openssl" version="1.0.1">
20 <repository changeset_revision="2f87040d5ea9" name="package_openssl_1_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
21 </package>
22
15 <package name="sqlite" version="3.8.3"> 23 <package name="sqlite" version="3.8.3">
16 <repository changeset_revision="3ff7aae9ae47" name="package_sqlite_3_8_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 24 <repository changeset_revision="3ff7aae9ae47" name="package_sqlite_3_8_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
17 </package> 25 </package>
26
18 <package name="gdbm" version="1.11"> 27 <package name="gdbm" version="1.11">
19 <repository changeset_revision="77ea468f199e" name="package_gdbm_1_11" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 28 <repository changeset_revision="77ea468f199e" name="package_gdbm_1_11" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
20 </package> 29 </package>
30
21 <package name="ncurses" version="5.9"> 31 <package name="ncurses" version="5.9">
22 <repository changeset_revision="c0735727b530" name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 32 <repository changeset_revision="c0735727b530" name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
23 </package> 33 </package>
34
24 <package name="python" version="2.7"> 35 <package name="python" version="2.7">
25 <install version="1.0"> 36 <install version="1.0">
26 <actions> 37 <actions>
27 <action type="download_by_url">https://www.python.org/ftp/python/2.7.9/Python-2.7.9.tgz</action> 38 <action type="download_by_url">https://www.python.org/ftp/python/2.7.7/Python-2.7.7.tgz</action>
28 39
29 <action type="set_environment_for_install"> 40 <action type="set_environment_for_install">
30 <repository changeset_revision="03abe628fbe8" name="package_zlib_1_2_8" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 41 <repository changeset_revision="03abe628fbe8" name="package_zlib_1_2_8" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
31 <package name="zlib" version="1.2.8" /> 42 <package name="zlib" version="1.2.8" />
32 </repository> 43 </repository>
37 <package name="bzlib" version="1.0.6" /> 48 <package name="bzlib" version="1.0.6" />
38 </repository> 49 </repository>
39 <repository changeset_revision="6554cb54e83b" name="package_xz_5_0_5" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 50 <repository changeset_revision="6554cb54e83b" name="package_xz_5_0_5" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
40 <package name="xz" version="5.0.5" /> 51 <package name="xz" version="5.0.5" />
41 </repository> 52 </repository>
53 <repository changeset_revision="2f87040d5ea9" name="package_openssl_1_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
54 <package name="openssl" version="1.0.1" />
55 </repository>
42 <repository changeset_revision="3ff7aae9ae47" name="package_sqlite_3_8_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 56 <repository changeset_revision="3ff7aae9ae47" name="package_sqlite_3_8_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
43 <package name="sqlite" version="3.8.3" /> 57 <package name="sqlite" version="3.8.3" />
44 </repository> 58 </repository>
45 <repository changeset_revision="77ea468f199e" name="package_gdbm_1_11" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 59 <repository changeset_revision="77ea468f199e" name="package_gdbm_1_11" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
46 <package name="gdbm" version="1.11" /> 60 <package name="gdbm" version="1.11" />
47 </repository> 61 </repository>
48 <repository changeset_revision="c0735727b530" name="package_ncurses_5_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 62 <repository changeset_revision="c0735727b530" name="package_ncurses_5_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
49 <package name="ncurses" version="5.9" /> 63 <package name="ncurses" version="5.9" />
50 </repository> 64 </repository>
51 </action> 65 </action>
52 <!-- by default python is not looking af LD_INCLUDE_PATH and Co. -->
53 <action type="shell_command">sed -i -e "s/if host_platform == 'atheos':/if True:/g" setup.py</action>
54 66
55 <action type="autoconf" /> 67 <action type="autoconf" />
68
56 <action type="download_file">https://bitbucket.org/pypa/setuptools/get/5.2.tar.bz2</action> 69 <action type="download_file">https://bitbucket.org/pypa/setuptools/get/5.2.tar.bz2</action>
57 <action type="shell_command">tar -xjf 5.2.tar.bz2</action> 70 <action type="shell_command">tar -xjf 5.2.tar.bz2</action>
58 <action type="change_directory">pypa-setuptools-f493e6c4ffd8</action> 71 <action type="change_directory">pypa-setuptools-f493e6c4ffd8</action>
59 72
60 <action type="shell_command"> 73 <action type="shell_command">export PATH=$PATH:$INSTALL_DIR/bin &amp;&amp;
61 export PATH=$PATH:$INSTALL_DIR/bin &amp;&amp;
62 export PYTHONHOME=$INSTALL_DIR &amp;&amp; 74 export PYTHONHOME=$INSTALL_DIR &amp;&amp;
63 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR &amp;&amp; 75 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR &amp;&amp;
64 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python2.7/site-packages/ &amp;&amp; 76 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python2.7/site-packages/ &amp;&amp;
65 export PKG_CONFIG_PATH=$PKG_CONFIG_PATH:$INSTALL_DIR/lib/pkgconfig &amp;&amp; 77 export PKG_CONFIG_PATH=$PKG_CONFIG_PATH:$INSTALL_DIR/lib/pkgconfig &amp;&amp;
66 $INSTALL_DIR/bin/python setup.py install --prefix=$INSTALL_DIR 78 $INSTALL_DIR/bin/python setup.py install --prefix=$INSTALL_DIR</action>
79 <action type="set_environment">
80 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
81 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
82 <environment_variable action="set_to" name="PYTHONHOME">$INSTALL_DIR</environment_variable>
83 <environment_variable action="prepend_to" name="PKG_CONFIG_PATH">$INSTALL_DIR/lib/pkgconfig</environment_variable>
67 </action> 84 </action>
68 <action type="set_environment"> 85
69 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> 86
70 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable> 87
71 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib</environment_variable> 88
72 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python2.7/site-packages</environment_variable>
73 <environment_variable action="set_to" name="PYTHONHOME">$INSTALL_DIR</environment_variable>
74 <environment_variable action="prepend_to" name="PKG_CONFIG_PATH">$INSTALL_DIR/lib/pkgconfig</environment_variable>
75 </action>
76 </actions> 89 </actions>
77 </install> 90 </install>
78 91
79 <readme> 92 <readme>
80 The Python programming language version 2.7. 93 The Python programming language version 2.7.