Mercurial > repos > iuc > package_python_2_7

comparison tool_dependencies.xml @ 36:22e17a8b5b82 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_python_2_7 commit 48fbe322d0f3ec023186989104ae4f4188b03a1d
author iuc
date Mon, 01 Jun 2015 22:45:03 -0400
parents 8534b229ff0b
children 44e7542c51e6
comparison
equal deleted inserted replaced
35:8534b229ff0b 36:22e17a8b5b82
2 <tool_dependency> 2 <tool_dependency>
3 <package name="zlib" version="1.2.8"> 3 <package name="zlib" version="1.2.8">
4 <repository changeset_revision="03abe628fbe8" name="package_zlib_1_2_8" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="03abe628fbe8" name="package_zlib_1_2_8" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6 <package name="readline" version="6.2"> 6 <package name="readline" version="6.2">
7 <repository changeset_revision="2e29c112999f" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="cbd5de2c9a7e" name="package_readline_6_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
8 </package> 8 </package>
9 <package name="bzlib" version="1.0.6"> 9 <package name="bzlib" version="1.0.6">
10 <repository changeset_revision="dc65c06c28e4" name="package_bzlib_1_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 10 <repository changeset_revision="70832954fc3c" name="package_bzlib_1_0" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
11 </package> 11 </package>
12 <package name="xz" version="5.0.5"> 12 <package name="xz" version="5.0.5">
13 <repository changeset_revision="74a067bc52c0" name="package_xz_5_0_5" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 13 <repository changeset_revision="c2168b2cb541" name="package_xz_5_0_5" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
14 </package> 14 </package>
15 <!-- 15 <!--
16 <package name="openssl" version="1.0"> 16 <package name="openssl" version="1.0">
17 <repository name="package_openssl_1_0" owner="iuc" prior_installation_required="True" /> 17 <repository name="package_openssl_1_0" owner="iuc" prior_installation_required="True" />
18 </package> 18 </package>
22 </package> 22 </package>
23 <package name="gdbm" version="1.11"> 23 <package name="gdbm" version="1.11">
24 <repository changeset_revision="77ea468f199e" name="package_gdbm_1_11" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 24 <repository changeset_revision="77ea468f199e" name="package_gdbm_1_11" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
25 </package> 25 </package>
26 <package name="ncurses" version="5.9"> 26 <package name="ncurses" version="5.9">
27 <repository changeset_revision="60419fc3e0de" name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 27 <repository changeset_revision="5b79af8b6396" name="package_ncurses_5_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
28 </package> 28 </package>
29 <package name="python" version="2.7"> 29 <package name="python" version="2.7">
30 <install version="1.0"> 30 <install version="1.0">
31 <actions> 31 <actions>
32 <action type="download_by_url">https://www.python.org/ftp/python/2.7.10/Python-2.7.10.tgz</action> 32 <action type="download_by_url">https://www.python.org/ftp/python/2.7.10/Python-2.7.10.tgz</action>
33 33
34 <action type="set_environment_for_install"> 34 <action type="set_environment_for_install">
35 <repository changeset_revision="03abe628fbe8" name="package_zlib_1_2_8" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 35 <repository changeset_revision="03abe628fbe8" name="package_zlib_1_2_8" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
36 <package name="zlib" version="1.2.8" /> 36 <package name="zlib" version="1.2.8" />
37 </repository> 37 </repository>
38 <repository changeset_revision="2e29c112999f" name="package_readline_6_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 38 <repository changeset_revision="cbd5de2c9a7e" name="package_readline_6_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
39 <package name="readline" version="6.2" /> 39 <package name="readline" version="6.2" />
40 </repository> 40 </repository>
41 <repository changeset_revision="dc65c06c28e4" name="package_bzlib_1_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 41 <repository changeset_revision="70832954fc3c" name="package_bzlib_1_0" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
42 <package name="bzlib" version="1.0.6" /> 42 <package name="bzlib" version="1.0.6" />
43 </repository> 43 </repository>
44 <repository changeset_revision="74a067bc52c0" name="package_xz_5_0_5" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 44 <repository changeset_revision="c2168b2cb541" name="package_xz_5_0_5" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
45 <package name="xz" version="5.0.5" /> 45 <package name="xz" version="5.0.5" />
46 </repository> 46 </repository>
47 <repository changeset_revision="9ba893c2353f" name="package_sqlite_3_8_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 47 <repository changeset_revision="9ba893c2353f" name="package_sqlite_3_8_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
48 <package name="sqlite" version="3.8.3" /> 48 <package name="sqlite" version="3.8.3" />
49 </repository> 49 </repository>
53 </repository> 53 </repository>
54 --> 54 -->
55 <repository changeset_revision="77ea468f199e" name="package_gdbm_1_11" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 55 <repository changeset_revision="77ea468f199e" name="package_gdbm_1_11" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
56 <package name="gdbm" version="1.11" /> 56 <package name="gdbm" version="1.11" />
57 </repository> 57 </repository>
58 <repository changeset_revision="60419fc3e0de" name="package_ncurses_5_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 58 <repository changeset_revision="5b79af8b6396" name="package_ncurses_5_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
59 <package name="ncurses" version="5.9" /> 59 <package name="ncurses" version="5.9" />
60 </repository> 60 </repository>
61 </action> 61 </action>
62 <!-- by default python is not looking af LD_INCLUDE_PATH and Co. --> 62 <!-- by default python is not looking af LD_INCLUDE_PATH and Co. -->
63 <action type="shell_command">sed -i -e "s/if host_platform == 'atheos':/if True:/g" setup.py</action> 63 <action type="shell_command">sed -i -e "s/if host_platform == 'atheos':/if True:/g" setup.py</action>
80 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable> 80 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
81 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib</environment_variable> 81 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib</environment_variable>
82 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python2.7/site-packages</environment_variable> 82 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python2.7/site-packages</environment_variable>
83 <environment_variable action="set_to" name="PYTHONHOME">$INSTALL_DIR</environment_variable> 83 <environment_variable action="set_to" name="PYTHONHOME">$INSTALL_DIR</environment_variable>
84 <environment_variable action="prepend_to" name="PKG_CONFIG_PATH">$INSTALL_DIR/lib/pkgconfig</environment_variable> 84 <environment_variable action="prepend_to" name="PKG_CONFIG_PATH">$INSTALL_DIR/lib/pkgconfig</environment_variable>
85
86 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[BZLIB_LIB_DIR]</environment_variable>
87 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[BZLIB_LIB_DIR]/source</environment_variable>
88
89 <!-- 85 <!--
90 <environment_variable action="prepend_to" name="PKG_CONFIG_PATH">$ENV[OPENSSL_ROOT_DIR]/lib/pkgconfig</environment_variable> 86 <environment_variable action="prepend_to" name="PKG_CONFIG_PATH">$ENV[OPENSSL_ROOT_DIR]/lib/pkgconfig</environment_variable>
91 <environment_variable action="prepend_to" name="LIBRARY_PATH">$ENV[OPENSSL_ROOT_DIR]/lib/</environment_variable> 87 <environment_variable action="prepend_to" name="LIBRARY_PATH">$ENV[OPENSSL_ROOT_DIR]/lib/</environment_variable>
92 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[OPENSSL_ROOT_DIR]/lib/</environment_variable> 88 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[OPENSSL_ROOT_DIR]/lib/</environment_variable>
93 <environment_variable action="prepend_to" name="C_INCLUDE_PATH">$ENV[OPENSSL_ROOT_DIR]/include/</environment_variable> 89 <environment_variable action="prepend_to" name="C_INCLUDE_PATH">$ENV[OPENSSL_ROOT_DIR]/include/</environment_variable>