view tool_dependencies.xml @ 5:b817b00b5fe5 draft

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author iuc
date Thu, 26 Feb 2015 22:37:23 -0500
parents abe08c0e0b84
children 5f0eab78f11e
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<?xml version="1.0"?>
<tool_dependency>
    <package name="ez_setup" version="0.9">
        <repository changeset_revision="196fdcfa98a7" name="package_ez_setup_0_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
    </package>
    <package name="pysam" version="0.7.7">
        <install version="1.0">
            <actions>
                <action type="download_by_url">https://pypi.python.org/packages/source/p/pysam/pysam-0.7.7.tar.gz</action>
                <action type="set_environment_for_install">
                    <repository changeset_revision="196fdcfa98a7" name="package_ez_setup_0_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
                        <package name="ez_setup" version="0.9" />
                    </repository>
                </action>
                <action type="shell_command">export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin</action>
                <action type="set_environment">
                    <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
                    <environment_variable action="set_to" name="PYSAM_PATH">$INSTALL_DIR</environment_variable>
                </action>
            </actions>
        </install>
        <readme>
            Installation of pysam, pyrex and python are required. The installation can be accessed via PYSAM_PATH.
        </readme>
    </package>
</tool_dependency>