Mercurial > repos > iuc > package_nwalign_0_3_1

diff tool_dependencies.xml @ 1:ec4aeb1d7207 draft

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Uploaded
author iuc
date Thu, 23 Apr 2015 08:58:27 -0400
parents 3f3bc5c80ee0
children 55e6a5a6fae4
line wrap: on
line diff
--- a/tool_dependencies.xml	Thu Apr 23 08:55:02 2015 -0400
+++ b/tool_dependencies.xml	Thu Apr 23 08:58:27 2015 -0400
@@ -1,21 +1,32 @@
 <?xml version="1.0"?>
 <tool_dependency>
-        <package name="nwalign" version="0.3.1">
-            <install version="1.0">
-                <actions>
-                    <action type="download_by_url">https://pypi.python.org/packages/source/n/nwalign/nwalign-0.3.1.tar.gz</action>
-                    <action type="make_directory">$INSTALL_DIR/lib/python</action>
-                    <action type="shell_command">
-                        export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; 
-                        python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
-                    </action>
-                    <action type="set_environment">
-                        <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
-                        <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
-                        <environment_variable action="set_to" name="NWALIGN_ROOT_PATH">$INSTALL_DIR</environment_variable>
-                    </action>
-                </actions>
-            </install>
-            <readme>Compiling nwalign requires a C compiler (typically gcc).</readme>
-        </package>
+    <package name="numpy" version="1.9">
+       <repository changeset_revision="266529386609" name="package_numpy_1_9" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
+    </package>
+    <package name="nwalign" version="0.3.1">
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url">https://pypi.python.org/packages/source/n/nwalign/nwalign-0.3.1.tar.gz</action>
+
+                <action type="set_environment_for_install">
+                    <repository changeset_revision="266529386609" name="package_numpy_1_9" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
+                        <package name="numpy" version="1.9" />
+                    </repository>
+                </action>
+
+
+                <action type="make_directory">$INSTALL_DIR/lib/python</action>
+                <action type="shell_command">
+                    export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; 
+                    python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
+                </action>
+                <action type="set_environment">
+                    <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
+                    <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
+                    <environment_variable action="set_to" name="NWALIGN_ROOT_PATH">$INSTALL_DIR</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>Compiling nwalign requires a C compiler (typically gcc).</readme>
+    </package>
 </tool_dependency>