Mercurial > repos > iuc > package_numpy_1_9

comparison tool_dependencies.xml @ 9:816d3480b0b1 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_numpy_1_9 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
author iuc
date Fri, 09 Oct 2015 05:09:17 -0400
parents 43cb426cb05d
children f9289486f06d
comparison
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8:43cb426cb05d 9:816d3480b0b1
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="atlas" version="3.10.2"> 3 <package name="atlas" version="3.10.2">
4 <repository changeset_revision="4778b172b895" name="package_atlas_3_10" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="86b7c19454fa" name="package_atlas_3_10" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6 <package name="numpy" version="1.9"> 6 <package name="numpy" version="1.9">
7 <install version="1.0"> 7 <install version="1.0">
8 <actions> 8 <actions>
9 <action type="download_by_url">https://pypi.python.org/packages/source/n/numpy/numpy-1.9.0.tar.gz#md5=510cee1c6a131e0a9eb759aa2cc62609</action> 9 <action md5sum="a1ed53432dbcd256398898d35bc8e645" type="download_by_url">https://pypi.python.org/packages/source/n/numpy/numpy-1.9.2.tar.gz</action>
10 <action type="make_directory">$INSTALL_DIR/lib/python</action> 10 <action type="make_directory">$INSTALL_DIR/lib/python</action>
11 <action type="set_environment_for_install"> 11 <action type="set_environment_for_install">
12 <repository changeset_revision="4778b172b895" name="package_atlas_3_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 12 <repository changeset_revision="86b7c19454fa" name="package_atlas_3_10" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
13 <package name="atlas" version="3.10.2" /> 13 <package name="atlas" version="3.10.2" />
14 </repository> 14 </repository>
15 </action> 15 </action>
16 <action type="shell_command"> 16 <action type="shell_command">
17 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; 17 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
18 export ATLAS=$ATLAS_ROOT_PATH &amp;&amp; 18 export ATLAS=$ATLAS_ROOT_PATH &amp;&amp;
19 python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin 19 python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin
20 </action> 20 </action>
21 <action type="set_environment"> 21 <action type="set_environment">
22 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable> 22 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR/lib/python</environment_variable>
23 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable> 23 <environment_variable action="prepend_to" name="PYTHONPATH">$INSTALL_DIR</environment_variable>
24 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[ATLAS_LIB_DIR]</environment_variable> 24 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
25 <environment_variable action="set_to" name="PYTHONPATH_NUMPY">$INSTALL_DIR/lib/python</environment_variable> 25 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[ATLAS_LIB_DIR]</environment_variable>
26 <environment_variable action="set_to" name="PATH_NUMPY">$INSTALL_DIR/bin</environment_variable> 26 <environment_variable action="set_to" name="PYTHONPATH_NUMPY">$INSTALL_DIR</environment_variable>
27 </action> 27 <environment_variable action="set_to" name="PATH_NUMPY">$INSTALL_DIR/bin</environment_variable>
28 </actions> 28 </action>
29 </install> 29 </actions>
30 <readme>Compiling numpy requires a C and Fortran compiler (typically gcc and gfortran). The PYTHONPATH for numpy can be accessed through PYTHONPATH_NUMPY and the binaries with PATH_NUMPY.</readme> 30 </install>
31 </package> 31 <readme>Compiling numpy requires a C and Fortran compiler (typically gcc and gfortran). The PYTHONPATH for numpy can be accessed through PYTHONPATH_NUMPY and the binaries with PATH_NUMPY.</readme>
32 </package>
32 </tool_dependency> 33 </tool_dependency>