Mercurial > repos > iuc > package_legacy_blast_2_2_22
changeset 0:b2a669334165 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_legacy_blast_2_2_22 commit 180a403421967d36f995941b1a4561349d75cfc5
| author | iuc |
|---|---|
| date | Fri, 24 Jun 2016 16:25:26 -0400 |
| parents | |
| children | |
| files | tool_dependencies.xml |
| diffstat | 1 files changed, 63 insertions(+), 0 deletions(-) [+] |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Fri Jun 24 16:25:26 2016 -0400 @@ -0,0 +1,63 @@ +<?xml version='1.0' encoding='utf-8'?> +<tool_dependency> + <package name="legacy_blast" version="2.2.22"> + <install version="1.0"> + <actions_group> + <!-- Download the binaries for BLAST compatible with 64-bit OSX. --> + <actions os="darwin" architecture="x86_64"> + <action type="download_by_url" target_filename="blast-2.2.22.tgz">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/legacy/2.2.22/blast-2.2.22-universal-macosx.tar.gz</action> + <action type="move_directory_files"> + <source_directory>bin</source_directory> + <destination_directory>$INSTALL_DIR</destination_directory> + </action> + </actions> + <!-- Download the binaries for BLAST compatible with 32-bit OSX. --> + <actions os="darwin" architecture="i386"> + <action type="download_by_url" target_filename="blast-2.2.22.tgz">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/legacy/2.2.22/blast-2.2.22-universal-macosx.tar.gz</action> + <action type="move_directory_files"> + <source_directory>bin</source_directory> + <destination_directory>$INSTALL_DIR</destination_directory> + </action> + </actions> + <!-- Download the binaries for BLAST compatible with 64-bit Linux. --> + <actions os="linux" architecture="x86_64"> + <action type="download_by_url" target_filename="blast-2.2.22.tgz">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/legacy/2.2.22/blast-2.2.22-x64-linux.tar.gz</action> + <action type="move_directory_files"> + <source_directory>bin</source_directory> + <destination_directory>$INSTALL_DIR</destination_directory> + </action> + </actions> + <!-- Download the binaries for BLAST compatible with 32-bit Linux (i386). --> + <actions os="linux" architecture="i386"> + <action type="download_by_url" target_filename="blast-2.2.22.tgz">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/legacy/2.2.22/blast-2.2.22-ia32-linux.tar.gz</action> + <action type="move_directory_files"> + <source_directory>bin</source_directory> + <destination_directory>$INSTALL_DIR</destination_directory> + </action> + </actions> + <!-- Download the binaries for BLAST compatible with 32-bit Linux (i686). --> + <actions os="linux" architecture="i686"> + <action type="download_by_url" target_filename="blast-2.2.22.tgz">ftp://ftp.ncbi.nlm.nih.gov/blast/executables/legacy/2.2.22/blast-2.2.22-ia32-linux.tar.gz</action> + <action type="move_directory_files"> + <source_directory>bin</source_directory> + <destination_directory>$INSTALL_DIR</destination_directory> + </action> + </actions> + <!-- The $PATH environment variable is only set if one of the above <actions> tags resulted in a successful installation. --> + <action type="set_environment"> + <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR</environment_variable> + </action> + </actions_group> + </install> + <readme> +*Repository Description* +The package_blast_legacy_2_2_22 repository downloads and builds the legacy NCBI Blast source code v2.2.22 on various operating systems and architectures. +The repository is a modification of the NCBI Blast Plus package. + +These links provide information for building the legacy NCBI Blast package in most environments. + +System requirements +http://blast.ncbi.nlm.nih.gov/Blast.cgi?CMD=Web&PAGE_TYPE=BlastDocs&DOC_TYPE=Download + </readme> + </package> +</tool_dependency>