Mercurial > repos > iuc > package_krona_2_5

annotate tool_dependencies.xml @ 0:94649047b80f draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
author iuc
date Fri, 09 Oct 2015 04:58:49 -0400
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94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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1 <?xml version="1.0"?>
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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2 <tool_dependency>
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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3 <package name="perl" version="5.18.1">
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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4 <repository changeset_revision="2590d4683481" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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5 </package>
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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6 <package name="krona" version="2.5">
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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7 <install version="1.0">
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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8 <actions>
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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9 <action type="download_by_url">https://depot.galaxyproject.org/package/source/KronaTools-2.5.tar</action>
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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10 <action type="set_environment_for_install">
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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11 <repository changeset_revision="2590d4683481" name="package_perl_5_18" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu">
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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12 <package name="perl" version="5.18.1" />
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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13 </repository>
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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14 </action>
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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15 <action type="move_directory_files">
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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16 <source_directory>.</source_directory>
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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17 <destination_directory>$INSTALL_DIR</destination_directory>
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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18 </action>
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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19 <!-- ./install.pl must be run inside $INSTALL_DIR . Moreover "change_directory" action does not work because $INSTALL_DIR is outside the defined working directory -->
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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20 <action type="shell_command">cd $INSTALL_DIR &amp;&amp; ./install.pl --prefix=$INSTALL_DIR</action>
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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21 <action type="set_environment">
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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22 <environment_variable action="prepend_to" name="PATH">$INSTALL_DIR/bin</environment_variable>
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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23 <environment_variable action="prepend_to" name="PERL5LIB">$INSTALL_DIR/lib</environment_variable>
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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24 </action>
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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25 </actions>
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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26 </install>
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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27 <readme />
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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28 </package>
94649047b80f planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_krona_2_5 commit e6f0b88b7a59f0a10827fd55436b137b13cd1921
iuc
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29 </tool_dependency>