Mercurial > repos > iuc > package_imagej_1_48

changeset 0:9fc25eeb40e4 draft default tip

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planemo upload for repository https://github.com/bgruening/galaxytools/tree/master/packages/package_imagej_1_48 commit 4bf97847c35c4dcf9638008b9b4b6c4e10015f19
author iuc
date Tue, 09 Jun 2015 12:20:19 -0400
parents
children
files tool_dependencies.xml
diffstat 1 files changed, 49 insertions(+), 0 deletions(-) [+]
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Tue Jun 09 12:20:19 2015 -0400
@@ -0,0 +1,49 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <package name="imagej" version="1.48">
+        <install version="1.0">
+            <actions_group>
+                <actions os="linux" architecture="x86_64">
+                    <action type="download_by_url">http://rsb.info.nih.gov/ij/download/linux/ij148-linux64.zip</action>
+                    <action type="move_directory_files">
+                        <source_directory>.</source_directory>
+                        <destination_directory>$INSTALL_DIR/bin</destination_directory>
+                    </action>
+                </actions>
+                <actions os="darwin" architecture="x86_64">
+                    <action type="download_by_url">http://rsb.info.nih.gov/ij/download/osx/ImageJ148.zip</action>
+                    <action type="move_directory_files">
+                        <source_directory>.</source_directory>
+                        <destination_directory>$INSTALL_DIR/bin</destination_directory>
+                    </action>
+                </actions>
+                <actions>
+                    <action type="download_by_url">http://rsb.info.nih.gov/ij/download/zips/ij148.zip</action>
+                    <action type="move_directory_files">
+                        <source_directory>.</source_directory>
+                        <destination_directory>$INSTALL_DIR/bin</destination_directory>
+                    </action>
+                </actions>
+                <action type="set_environment">
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                    <environment_variable name="IMAGEJ_ROOT_DIR" action="set_to">$INSTALL_DIR</environment_variable>
+                    <environment_variable name="IMAGEJ_PLUGINS_DIR" action="set_to">$INSTALL_DIR/bin/plugins</environment_variable>
+                </action>
+            </actions_group>
+        </install>
+        <readme>
+            <![CDATA[
+                ImageJ is a public domain Java image processing program inspired by NIH Image for the Macintosh.
+                It runs, either as an online applet or as a downloadable application, on any computer with a
+                Java 1.4 or later virtual machine.
+                
+                It can display, edit, analyze, process, save and print 8-bit, 16-bit and 32-bit images. It can read
+                many image formats including TIFF, GIF, JPEG, BMP, DICOM, FITS and "raw". It supports "stacks", a
+                series of images that share a single window. It is multithreaded, so time-consuming operations such
+                as image file reading can be performed in parallel with other operations.
+                
+                See http://rsb.info.nih.gov/ij/docs/intro.html
+            ]]>
+        </readme>
+    </package>
+</tool_dependency>