Mercurial > repos > iuc > package_htseq_0_6

comparison tool_dependencies.xml @ 19:25da74c1ff6d draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_htseq_0_6 commit bd736b6361ba659a1251dd1a1a05f7e3b633bdf5
author iuc
date Tue, 22 Dec 2015 19:19:46 -0500
parents 0d05080e2809
children
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18:0d05080e2809 19:25da74c1ff6d
2 <tool_dependency> 2 <tool_dependency>
3 <package name="numpy" version="1.7.1"> 3 <package name="numpy" version="1.7.1">
4 <repository changeset_revision="5c489d2d630b" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="5c489d2d630b" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6 <package name="matplotlib" version="1.2.1"> 6 <package name="matplotlib" version="1.2.1">
7 <repository changeset_revision="a0b5d8fc4a9b" name="package_matplotlib_1_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="de13f10b590f" name="package_matplotlib_1_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
8 </package> 8 </package>
9 <package name="htseq" version="0.6.1"> 9 <package name="htseq" version="0.6.1">
10 <install version="1.0"> 10 <install version="1.0">
11 <actions> 11 <actions>
12 <action type="download_by_url">https://pypi.python.org/packages/source/H/HTSeq/HTSeq-0.6.1.tar.gz</action> 12 <action type="download_by_url">https://pypi.python.org/packages/source/H/HTSeq/HTSeq-0.6.1.tar.gz</action>
13
14 <action type="set_environment_for_install"> 13 <action type="set_environment_for_install">
15 <repository changeset_revision="5c489d2d630b" name="package_numpy_1_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 14 <repository changeset_revision="5c489d2d630b" name="package_numpy_1_7" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
16 <package name="numpy" version="1.7.1" /> 15 <package name="numpy" version="1.7.1" />
17 </repository> 16 </repository>
18 <repository changeset_revision="a0b5d8fc4a9b" name="package_matplotlib_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 17 <repository changeset_revision="de13f10b590f" name="package_matplotlib_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
19 <package name="matplotlib" version="1.2.1" /> 18 <package name="matplotlib" version="1.2.1" />
20 </repository> 19 </repository>
21 </action> 20 </action>
22
23 <action type="make_directory">$INSTALL_DIR/lib/python</action> 21 <action type="make_directory">$INSTALL_DIR/lib/python</action>
24 <action type="shell_command"> 22 <action type="shell_command">
25 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp; 23 export PYTHONPATH=$PYTHONPATH:$INSTALL_DIR/lib/python &amp;&amp;
26 python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin</action> 24 python setup.py install --install-lib $INSTALL_DIR/lib/python --install-scripts $INSTALL_DIR/bin</action>
27 <action type="set_environment"> 25 <action type="set_environment">