Mercurial > repos > iuc > package_gfclient_35x1
diff tool_dependencies.xml @ 0:c457805d67c0 draft
Uploaded
| author | iuc |
|---|---|
| date | Mon, 06 Apr 2015 17:58:46 -0400 |
| parents | |
| children | 7e7a83e19348 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/tool_dependencies.xml Mon Apr 06 17:58:46 2015 -0400 @@ -0,0 +1,31 @@ +<tool_dependency> + <package name="gfClient" version="35x1"> + <install version="1.0"> + <actions> + <action type="download_binary"> + <url_template os="linux" architecture="x86_64">https://github.com/bgruening/download_store/raw/master/ucsc/linux/x86_64/gfClient_35x1</url_template> + <url_template os="darwin" architecture="i686">https://github.com/bgruening/download_store/raw/master/ucsc/darwin/i386/gfClient_35x1</url_template> + <url_template os="darwin" architecture="i386">https://github.com/bgruening/download_store/raw/master/ucsc/darwin/i386/gfClient_35x1</url_template> + <url_template os="darwin" architecture="x86_64">https://github.com/bgruening/download_store/raw/master/ucsc/darwin/x86_64/gfClient_35x1</url_template> + </action> + + <action type="move_file"> + <source>gfClient_35x1</source> + <destination>$INSTALL_DIR/bin/gfClient</destination> + </action> + <action type="chmod"> + <file mode="755">$INSTALL_DIR/bin/gfClient</file> + </action> + <action type="set_environment"> + <environment_variable name="PATH" action="append_to">$INSTALL_DIR/bin</environment_variable> + <environment_variable name="GFCLIENT_ROOT_PATH" action="append_to">$INSTALL_DIR</environment_variable> + </action> + + </actions> + </install> + <readme> +gfClient: a program that queries gfServer over the network, and then does a detailed alignment of the query sequence with regions found by gfServer. +http://genome.ucsc.edu/goldenPath/help/blatSpec.html + </readme> + </package> +</tool_dependency>
