comparison tool_dependencies.xml @ 4:a8a95f47e5aa draft

planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_eigen_2_0 commit 97a064489364118d108b0dd2cfb4d9bc53080837
author iuc
date Thu, 19 Nov 2015 13:16:58 -0500
parents 08253ca817b7
children 53adc55e10f2
comparison
equal deleted inserted replaced
3:08253ca817b7 4:a8a95f47e5aa
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="cmake" version="3.2.3"> 3 <package name="cmake" version="3.2.3">
4 <repository changeset_revision="e932c7599efd" name="package_cmake_3_2_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="2da7b99cb1a1" name="package_cmake_3_2_3" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6
6 <package name="eigen2" version="2.0.17"> 7 <package name="eigen2" version="2.0.17">
7 <install version="1.0"> 8 <install version="1.0">
8 <actions> 9 <actions>
9 <action target_filename="eigen-eigen-b23437e61a07.tgz" type="download_by_url">http://bitbucket.org/eigen/eigen/get/2.0.17.tar.gz</action> 10 <action type="download_by_url">http://bitbucket.org/eigen/eigen/get/2.0.17.tar.gz</action>
10
11 <action type="set_environment_for_install">
12 <repository changeset_revision="e932c7599efd" name="package_cmake_3_2_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
13 <package name="cmake" version="3.2.3" />
14 </repository>
15 </action>
16
17 <action type="make_directory">$INSTALL_DIR/unpacked_source</action> 11 <action type="make_directory">$INSTALL_DIR/unpacked_source</action>
18 <action type="shell_command">cp -r * $INSTALL_DIR/unpacked_source</action> 12 <action type="shell_command">cp -r * $INSTALL_DIR/unpacked_source</action>
19 <action type="make_directory">build</action> 13 <action type="make_directory">build</action>
20 <action type="change_directory">build</action> 14 <action type="change_directory">build</action>
21 15
22 <action type="shell_command">cmake .. -DCMAKE_INSTALL_PREFIX=$INSTALL_DIR/eigen2/</action> 16 <action type="set_environment_for_install">
17 <repository changeset_revision="2da7b99cb1a1" name="package_cmake_3_2_3" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
18 <package name="cmake" version="3.2.3" />
19 </repository>
20 </action>
21
22 <action type="shell_command">cmake .. -DCMAKE_INSTALL_PREFIX=$INSTALL_DIR/eigen3/</action>
23 <action type="make_install" /> 23 <action type="make_install" />
24 24
25 <action type="set_environment"> 25 <action type="set_environment">
26 <environment_variable action="set_to" name="EIGEN2_SOURCE_PATH">$INSTALL_DIR/unpacked_source</environment_variable> 26 <environment_variable action="set_to" name="EIGEN2_SOURCE_PATH">$INSTALL_DIR/unpacked_source</environment_variable>
27 <environment_variable action="set_to" name="EIGEN2_INCLUDE_PATH">$INSTALL_DIR/eigen2/include</environment_variable> 27 <environment_variable action="set_to" name="EIGEN2_INCLUDE_PATH">$INSTALL_DIR/eigen2/include</environment_variable>