Mercurial > repos > iuc > package_deseq2_1_8_2

comparison tool_dependencies.xml @ 3:81a3e281bf21 draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_deseq2_1_8_2 commit bd736b6361ba659a1251dd1a1a05f7e3b633bdf5
author iuc
date Tue, 22 Dec 2015 19:12:56 -0500
parents acbeda52bf87
children
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2:acbeda52bf87 3:81a3e281bf21
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="R" version="3.2.1"> 3 <package name="R" version="3.2.1">
4 <repository changeset_revision="918315e51bd5" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 4 <repository changeset_revision="c6ebd3a51334" name="package_r_3_2_1" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
5 </package> 5 </package>
6 <package name="libxml2" version="2.9.1"> 6 <package name="libxml2" version="2.9.1">
7 <repository changeset_revision="2a70d8fd172e" name="package_libxml2_2_9_1" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="492a5c665b59" name="package_libxml2_2_9_1" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
8 </package> 8 </package>
9 <package name="deseq2" version="1.8.2"> 9 <package name="deseq2" version="1.8.2">
10 <install version="1.0"> 10 <install version="1.0">
11 <actions> 11 <actions>
12 <action type="setup_r_environment"> 12 <action type="setup_r_environment">
13 <repository changeset_revision="918315e51bd5" name="package_r_3_2_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 13 <repository changeset_revision="c6ebd3a51334" name="package_r_3_2_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
14 <package name="R" version="3.2.1" /> 14 <package name="R" version="3.2.1" />
15 </repository> 15 </repository>
16 <!-- libxml2 needs to be sourced after R because R also was compiled against a different version of libxml2 --> 16 <!-- libxml2 needs to be sourced after R because R also was compiled against a different version of libxml2 -->
17 <repository changeset_revision="2a70d8fd172e" name="package_libxml2_2_9_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> 17 <repository changeset_revision="492a5c665b59" name="package_libxml2_2_9_1" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu">
18 <package name="libxml2" version="2.9.1" /> 18 <package name="libxml2" version="2.9.1" />
19 </repository> 19 </repository>
20 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/BiocGenerics_0.14.0.tar.gz</package> 20 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/BiocGenerics_0.14.0.tar.gz</package>
21 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/S4Vectors_0.6.5.tar.gz</package> 21 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/S4Vectors_0.6.5.tar.gz</package>
22 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/IRanges_2.2.7.tar.gz</package> 22 <package>https://github.com/bgruening/download_store/raw/master/DESeq2-1_8_1/IRanges_2.2.7.tar.gz</package>