Mercurial > repos > iuc > package_deeptools_1_5_9

comparison tool_dependencies.xml @ 4:59e1631c2f09 draft

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author bgruening
date Thu, 26 Feb 2015 12:25:37 -0500
parents ebb8126cb112
children 9953dda72a1c
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3:ebb8126cb112 4:59e1631c2f09
5 </package> 5 </package>
6 <package name="numpy" version="1.7.1"> 6 <package name="numpy" version="1.7.1">
7 <repository changeset_revision="6a7842f2f960" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 7 <repository changeset_revision="6a7842f2f960" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
8 </package> 8 </package>
9 <package name="matplotlib" version="1.2.1"> 9 <package name="matplotlib" version="1.2.1">
10 <repository changeset_revision="b08a9f0f28ec" name="package_matplotlib_1_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 10 <repository changeset_revision="81e2784a1e85" name="package_matplotlib_1_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
11 </package> 11 </package>
12 <package name="scipy" version="0.12.0"> 12 <package name="scipy" version="0.12.0">
13 <repository changeset_revision="6d8201c2a767" name="package_scipy_0_12" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> 13 <repository changeset_revision="6d8201c2a767" name="package_scipy_0_12" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" />
14 </package> 14 </package>
15 <package name="pysam" version="0.7.7"> 15 <package name="pysam" version="0.7.7">
33 <package name="bx-python" version="0.7.1" /> 33 <package name="bx-python" version="0.7.1" />
34 </repository> 34 </repository>
35 <repository changeset_revision="6a7842f2f960" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu"> 35 <repository changeset_revision="6a7842f2f960" name="package_numpy_1_7" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu">
36 <package name="numpy" version="1.7.1" /> 36 <package name="numpy" version="1.7.1" />
37 </repository> 37 </repository>
38 <repository changeset_revision="b08a9f0f28ec" name="package_matplotlib_1_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu"> 38 <repository changeset_revision="81e2784a1e85" name="package_matplotlib_1_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu">
39 <package name="matplotlib" version="1.2.1" /> 39 <package name="matplotlib" version="1.2.1" />
40 </repository> 40 </repository>
41 <repository changeset_revision="6d8201c2a767" name="package_scipy_0_12" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu"> 41 <repository changeset_revision="6d8201c2a767" name="package_scipy_0_12" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu">
42 <package name="scipy" version="0.12.0" /> 42 <package name="scipy" version="0.12.0" />
43 </repository> 43 </repository>
65 <!-- include numpy --> 65 <!-- include numpy -->
66 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable> 66 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_NUMPY]</environment_variable>
67 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable> 67 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_NUMPY]</environment_variable>
68 <!-- include matplotlib --> 68 <!-- include matplotlib -->
69 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_MATPLOTLIB]</environment_variable> 69 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_MATPLOTLIB]</environment_variable>
70 <environment_variable action="prepend_to" name="LD_LIBRARY_PATH">$ENV[MATPLOTLIB_LIB_PATH]</environment_variable>
70 <!-- include scipy --> 71 <!-- include scipy -->
71 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_SCIPY]</environment_variable> 72 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[PYTHONPATH_SCIPY]</environment_variable>
72 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_SCIPY]</environment_variable> 73 <environment_variable action="prepend_to" name="PATH">$ENV[PATH_SCIPY]</environment_variable>
73 <!-- include bx-python --> 74 <!-- include bx-python -->
74 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[BX_PYTHON_PATH]/lib/python</environment_variable> 75 <environment_variable action="prepend_to" name="PYTHONPATH">$ENV[BX_PYTHON_PATH]/lib/python</environment_variable>