Mercurial > repos > iuc > package_cummerbund_2_8_2
comparison tool_dependencies.xml @ 2:b95b8f0b8dca draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_cummerbund_2_8_2 commit f6a91dff96780be542371e30270e23f8aac65770
| author | iuc |
|---|---|
| date | Sun, 24 May 2015 10:50:24 -0400 |
| parents | f7fb9c79a4c6 |
| children | 097cafd685fd |
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| 1:f7fb9c79a4c6 | 2:b95b8f0b8dca |
|---|---|
| 1 <?xml version="1.0"?> | 1 <?xml version="1.0"?> |
| 2 <tool_dependency> | 2 <tool_dependency> |
| 3 <package name="libcurl" version="7.35"> | |
| 4 <repository changeset_revision="f0803253ba0b" name="package_libcurl_7_35" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> | |
| 5 </package> | |
| 3 <package name="R" version="3.1.2"> | 6 <package name="R" version="3.1.2"> |
| 4 <repository changeset_revision="41f43a2064ba" name="package_r_3_1_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> | 7 <repository changeset_revision="41f43a2064ba" name="package_r_3_1_2" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu" /> |
| 5 </package> | 8 </package> |
| 6 <package name="cummeRbund" version="2.8.2"> | 9 <package name="cummeRbund" version="2.8.2"> |
| 7 <install version="1.0"> | 10 <install version="1.0"> |
| 8 <actions> | 11 <actions> |
| 9 <action type="setup_r_environment"> | 12 <action type="setup_r_environment"> |
| 10 <repository changeset_revision="41f43a2064ba" name="package_r_3_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> | 13 <repository changeset_revision="41f43a2064ba" name="package_r_3_1_2" owner="iuc" toolshed="https://testtoolshed.g2.bx.psu.edu"> |
| 11 <package name="R" version="3.1.2" /> | 14 <package name="R" version="3.1.2" /> |
| 12 </repository> | 15 </repository> |
| 13 <package>http://cran.r-project.org/src/contrib/DBI_0.3.1.tar.gz</package> | 16 <repository changeset_revision="f0803253ba0b" name="package_libcurl_7_35" owner="iuc" prior_installation_required="True" toolshed="https://testtoolshed.g2.bx.psu.edu"> |
| 14 <package>http://cran.r-project.org/src/contrib/bitops_1.0-6.tar.gz</package> | 17 <package name="libcurl" version="7.35" /> |
| 15 <package>http://cran.r-project.org/src/contrib/RCurl_1.95-4.5.tar.gz</package> | 18 </repository> |
| 16 <package>http://cran.r-project.org/src/contrib/XML_3.98-1.1.tar.gz</package> | 19 <package>https://depot.galaxyproject.org/package/noarch/DBI_0.3.1.tar.gz</package> |
| 17 <package>http://cran.r-project.org/src/contrib/RSQLite_1.0.0.tar.gz</package> | 20 <package>https://depot.galaxyproject.org/package/noarch/bitops_1.0-6.tar.gz</package> |
| 18 <package>http://cran.r-project.org/src/contrib/digest_0.6.8.tar.gz</package> | 21 <package>https://depot.galaxyproject.org/package/noarch/RCurl_1.95-4.5.tar.gz</package> |
| 19 <package>http://cran.r-project.org/src/contrib/Rcpp_0.11.3.tar.gz</package> | 22 <package>https://depot.galaxyproject.org/package/noarch/XML_3.98-1.1.tar.gz</package> |
| 20 <package>http://cran.r-project.org/src/contrib/plyr_1.8.1.tar.gz</package> | 23 <package>https://depot.galaxyproject.org/package/noarch/RSQLite_1.0.0.tar.gz</package> |
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| 23 <package>http://cran.r-project.org/src/contrib/stringr_0.6.2.tar.gz</package> | 26 <package>https://depot.galaxyproject.org/package/noarch/plyr_1.8.1.tar.gz</package> |
| 24 <package>http://cran.r-project.org/src/contrib/reshape2_1.4.1.tar.gz</package> | 27 <package>https://depot.galaxyproject.org/package/noarch/gtable_0.1.2.tar.gz</package> |
| 25 <package>http://cran.r-project.org/src/contrib/RColorBrewer_1.1-2.tar.gz</package> | 28 <package>https://depot.galaxyproject.org/package/noarch/proto_0.3-10.tar.gz</package> |
| 26 <package>http://cran.r-project.org/src/contrib/dichromat_2.0-0.tar.gz</package> | 29 <package>https://depot.galaxyproject.org/package/noarch/stringr_0.6.2.tar.gz</package> |
| 27 <package>http://cran.r-project.org/src/contrib/labeling_0.3.tar.gz</package> | 30 <package>https://depot.galaxyproject.org/package/noarch/reshape2_1.4.1.tar.gz</package> |
| 28 <package>http://cran.r-project.org/src/contrib/colorspace_1.2-4.tar.gz</package> | 31 <package>https://depot.galaxyproject.org/package/noarch/RColorBrewer_1.1-2.tar.gz</package> |
| 29 <package>http://cran.r-project.org/src/contrib/munsell_0.4.2.tar.gz</package> | 32 <package>https://depot.galaxyproject.org/package/noarch/dichromat_2.0-0.tar.gz</package> |
| 30 <package>http://cran.r-project.org/src/contrib/scales_0.2.4.tar.gz</package> | 33 <package>https://depot.galaxyproject.org/package/noarch/labeling_0.3.tar.gz</package> |
| 31 <package>http://cran.r-project.org/src/contrib/ggplot2_1.0.0.tar.gz</package> | 34 <package>https://depot.galaxyproject.org/package/noarch/colorspace_1.2-4.tar.gz</package> |
| 32 <package>http://cran.r-project.org/src/contrib/fastcluster_1.1.15.tar.gz</package> | 35 <package>https://depot.galaxyproject.org/package/noarch/munsell_0.4.2.tar.gz</package> |
| 33 <package>http://cran.r-project.org/src/contrib/plyr_1.8.1.tar.gz</package> | 36 <package>https://depot.galaxyproject.org/package/noarch/scales_0.2.4.tar.gz</package> |
| 34 <package>http://cran.r-project.org/src/contrib/getopt_1.20.0.tar.gz</package> | 37 <package>https://depot.galaxyproject.org/package/noarch/ggplot2_1.0.0.tar.gz</package> |
| 35 <package>http://cran.r-project.org/src/contrib/rjson_0.2.15.tar.gz</package> | 38 <package>https://depot.galaxyproject.org/package/noarch/fastcluster_1.1.13.tar.gz</package> |
| 36 <package>http://cran.r-project.org/src/contrib/findpython_1.0.1.tar.gz</package> | 39 <package>https://depot.galaxyproject.org/package/noarch/plyr_1.8.1.tar.gz</package> |
| 37 <package>http://cran.r-project.org/src/contrib/argparse_1.0.1.tar.gz</package> | 40 <package>https://depot.galaxyproject.org/package/noarch/getopt_1.20.0.tar.gz</package> |
| 38 <package>http://cran.r-project.org/src/contrib/lattice_0.20-29.tar.gz</package> | 41 <package>https://depot.galaxyproject.org/package/noarch/rjson_0.2.15.tar.gz</package> |
| 39 <package>http://cran.r-project.org/src/contrib/latticeExtra_0.6-26.tar.gz</package> | 42 <package>https://depot.galaxyproject.org/package/noarch/findpython_1.0.1.tar.gz</package> |
| 40 <package>http://cran.r-project.org/src/contrib/checkmate_1.5.1.tar.gz</package> | 43 <package>https://depot.galaxyproject.org/package/noarch/argparse_1.0.1.tar.gz</package> |
| 41 <package>http://cran.r-project.org/src/contrib/BBmisc_1.8.tar.gz</package> | 44 <package>https://depot.galaxyproject.org/package/noarch/lattice_0.20-29.tar.gz</package> |
| 42 <package>http://cran.r-project.org/src/contrib/brew_1.0-6.tar.gz</package> | 45 <package>https://depot.galaxyproject.org/package/noarch/latticeExtra_0.6-26.tar.gz</package> |
| 43 <package>http://cran.r-project.org/src/contrib/fail_1.2.tar.gz</package> | 46 <package>https://depot.galaxyproject.org/package/noarch/checkmate_1.5.1.tar.gz</package> |
| 44 <package>http://cran.r-project.org/src/contrib/base64enc_0.1-2.tar.gz</package> | 47 <package>https://depot.galaxyproject.org/package/noarch/BBmisc_1.8.tar.gz</package> |
| 45 <package>http://cran.r-project.org/src/contrib/sendmailR_1.2-1.tar.gz</package> | 48 <package>https://depot.galaxyproject.org/package/noarch/brew_1.0-6.tar.gz</package> |
| 46 <package>http://cran.r-project.org/src/contrib/BatchJobs_1.5.tar.gz</package> | 49 <package>https://depot.galaxyproject.org/package/noarch/fail_1.2.tar.gz</package> |
| 47 <package>http://cran.r-project.org/src/contrib/iterators_1.0.7.tar.gz</package> | 50 <package>https://depot.galaxyproject.org/package/noarch/base64enc_0.1-2.tar.gz</package> |
| 48 <package>http://cran.r-project.org/src/contrib/codetools_0.2-9.tar.gz</package> | 51 <package>https://depot.galaxyproject.org/package/noarch/sendmailR_1.2-1.tar.gz</package> |
| 49 <package>http://cran.r-project.org/src/contrib/foreach_1.4.2.tar.gz</package> | 52 <package>https://depot.galaxyproject.org/package/noarch/BatchJobs_1.5.tar.gz</package> |
| 50 <package>http://cran.r-project.org/src/contrib/Formula_1.1-2.tar.gz</package> | 53 <package>https://depot.galaxyproject.org/package/noarch/iterators_1.0.7.tar.gz</package> |
| 51 <package>http://cran.r-project.org/src/contrib/survival_2.37-7.tar.gz</package> | 54 <package>https://depot.galaxyproject.org/package/noarch/codetools_0.2-9.tar.gz</package> |
| 52 <package>http://cran.r-project.org/src/contrib/acepack_1.3-3.3.tar.gz</package> | 55 <package>https://depot.galaxyproject.org/package/noarch/foreach_1.4.2.tar.gz</package> |
| 53 <package>http://cran.r-project.org/src/contrib/Hmisc_3.14-6.tar.gz</package> | 56 <package>https://depot.galaxyproject.org/package/noarch/Formula_1.1-2.tar.gz</package> |
| 54 <package>http://cran.r-project.org/src/contrib/R.methodsS3_1.6.1.tar.gz</package> | 57 <package>https://depot.galaxyproject.org/package/noarch/survival_2.37-7.tar.gz</package> |
| 55 <package>http://cran.r-project.org/src/contrib/matrixStats_0.12.2.tar.gz</package> | 58 <package>https://depot.galaxyproject.org/package/noarch/acepack_1.3-3.3.tar.gz</package> |
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| 58 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/IRanges_2.0.1.tar.gz</package> | 61 <package>https://depot.galaxyproject.org/package/noarch/matrixStats_0.12.2.tar.gz</package> |
| 59 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/GenomeInfoDb_1.2.4.tar.gz</package> | 62 <package>https://depot.galaxyproject.org/package/noarch/BiocGenerics_0.12.1.tar.gz</package> |
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| 76 <package>http://www.bioconductor.org/packages/release/bioc/src/contrib/cummeRbund_2.8.2.tar.gz</package> | 79 <package>https://depot.galaxyproject.org/package/noarch/VariantAnnotation_1.12.7.tar.gz</package> |
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| 77 </action> | 83 </action> |
| 78 </actions> | 84 </actions> |
| 79 </install> | 85 </install> |
| 80 <readme> | 86 <readme> |
| 81 </readme> | 87 </readme> |
