Mercurial > repos > iuc > package_bedtools_2_23

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
author iuc
date Wed, 20 May 2015 18:00:30 -0400
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c472a4f6a603 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
iuc
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1 <?xml version="1.0"?>
c472a4f6a603 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
iuc
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2 <tool_dependency>
c472a4f6a603 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
iuc
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3 <package name="bedtools" version="2.23">
c472a4f6a603 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
iuc
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4 <install version="1.0">
c472a4f6a603 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
iuc
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5 <actions>
c472a4f6a603 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
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6 <action type="download_by_url">https://github.com/arq5x/bedtools2/releases/download/v2.23.0/bedtools-2.23.0.tar.gz</action>
c472a4f6a603 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
iuc
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7 <action type="shell_command">make</action>
c472a4f6a603 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
iuc
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8 <action type="move_directory_files">
c472a4f6a603 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
iuc
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9 <source_directory>bin</source_directory>
c472a4f6a603 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
iuc
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10 <destination_directory>$INSTALL_DIR/bin</destination_directory>
c472a4f6a603 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
iuc
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11 </action>
c472a4f6a603 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
iuc
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12 <action type="set_environment">
c472a4f6a603 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
iuc
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13 <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
c472a4f6a603 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
iuc
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14 </action>
c472a4f6a603 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
iuc
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15 </actions>
c472a4f6a603 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
iuc
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16 </install>
c472a4f6a603 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
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17 <readme>BEDTools is a collection of utilities for comparing, summarizing, and intersecting genomic features in BED, GTF/GFF, VCF and BAM formats.</readme>
c472a4f6a603 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
iuc
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18 </package>
c472a4f6a603 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
iuc
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19 </tool_dependency>
c472a4f6a603 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
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c472a4f6a603 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
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c472a4f6a603 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/packages/package_bedtools_2_23 commit cce2b33cf900d1f90db7e890868123a1a4556401-dirty
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