comparison tool_dependencies.xml @ 1:15c7aaf75626 draft

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author bgruening
date Fri, 10 Jan 2014 12:05:00 -0500
parents 044d68a0c07f
children ea89a5911878
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0:044d68a0c07f 1:15c7aaf75626
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool_dependency> 2 <tool_dependency>
3 <package name="bedtools" version="2.18.2"> 3 <package name="bedtools" version="2.18.2">
4 <install version="1.0"> 4 <install version="1.0">
5 <actions> 5 <actions>
6 <action type="shell_command">git clone --recursive https://github.com/arq5x/bedtools.git</action> 6 <action type="shell_command">git clone --recursive https://github.com/arq5x/bedtools2.git</action>
7 <action type="shell_command">git reset --hard 393fc3b9b766c76cc62e3f0df4e59ffbff3a55fb</action> 7 <action type="shell_command">git reset --hard 393fc3b9b766c76cc62e3f0df4e59ffbff3a55fb</action>
8 <action type="shell_command">make</action> 8 <action type="shell_command">make</action>
9 <action type="move_directory_files"> 9 <action type="move_directory_files">
10 <source_directory>bin</source_directory> 10 <source_directory>bin</source_directory>
11 <destination_directory>$INSTALL_DIR/bin</destination_directory> 11 <destination_directory>$INSTALL_DIR/bin</destination_directory>