Mercurial > repos > iuc > onto_tk_get_root_terms
comparison onto_macros.xml @ 0:a1cb3f520a10 draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/onto-toolkit commit 9422f839ae354d4c26b02d4494abdeaad518d0e6
| author | iuc |
|---|---|
| date | Fri, 10 Nov 2017 11:28:30 -0500 |
| parents | |
| children |
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| -1:000000000000 | 0:a1cb3f520a10 |
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| 1 <macros> | |
| 2 <token name="@VERSION@">1.45</token> | |
| 3 <xml name="requirements"> | |
| 4 <requirements> | |
| 5 <requirement type="package" version="@VERSION@">perl-onto-perl</requirement> | |
| 6 <yield /> | |
| 7 </requirements> | |
| 8 </xml> | |
| 9 <xml name="input_ontology"> | |
| 10 <param name="input" format="obo" type="data" label="Ontology file"/> | |
| 11 </xml> | |
| 12 <xml name="term_id"> | |
| 13 <param name="term_id" type="text" value="" label="Term ID"> | |
| 14 <expand macro="sanitize_ids" /> | |
| 15 </param> | |
| 16 </xml> | |
| 17 <xml name="rel_id"> | |
| 18 <param name="rel_id" type="text" value="" label="Relationship ID"> | |
| 19 <expand macro="sanitize_ids" /> | |
| 20 </param> | |
| 21 </xml> | |
| 22 <xml name="citations"> | |
| 23 <citations> | |
| 24 <citation type="doi">10.1186/1471-2105-11-S12-S8</citation> | |
| 25 </citations> | |
| 26 </xml> | |
| 27 <xml name="sanitize_ids"> | |
| 28 <sanitizer invalid_char=""> | |
| 29 <valid initial="string.letters,string.digits"><add value="_" /><add value=":" /> </valid> | |
| 30 </sanitizer> | |
| 31 </xml> | |
| 32 <xml name="sanitize_urls"> | |
| 33 <sanitizer invalid_char=""> | |
| 34 <valid initial="string.letters,string.digits"><add value="_" /><add value=":" /><add value="/" /></valid> | |
| 35 </sanitizer> | |
| 36 </xml> | |
| 37 </macros> |
