Mercurial > repos > iuc > ont_fast5_api_fast5_subset

comparison fast5_subset.xml @ 2:621ebf6c29e4 draft

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"planemo upload for repository https://github.com/nanoporetech/ont_fast5_api/ commit 2df36b6d30fd69ea532a4fd42daf4741363074f3"
author iuc
date Sun, 28 Jun 2020 16:17:16 +0000
parents 41bac7dcb43e
children 440d05c01614
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1:41bac7dcb43e 2:621ebf6c29e4
12 mkdir -p './data' && 12 mkdir -p './data' &&
13 tar -xf '$input' -C './data' && 13 tar -xf '$input' -C './data' &&
14 14
15 ## run 15 ## run
16 fast5_subset 16 fast5_subset
17 --recursive
17 ## required 18 ## required
18 --input './data' 19 --input './data'
19 @SAVEPATH@ 20 @SAVEPATH@
20 --read_id_list '$read_id_list' 21 --read_id_list '$read_id_list'
21 ## optional 22 ## optional