Mercurial > repos > iuc > ncbi_eutils_egquery
view egquery.xml @ 3:3ebc86b520d7 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_entrez_eutils commit 041f11d6eb83568deda382857b121274dffe9825
| author | iuc |
|---|---|
| date | Fri, 10 Jun 2016 14:48:52 -0400 |
| parents | b4018986e21a |
| children | 20a86bfb54eb |
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<?xml version="1.0"?> <tool id="ncbi_eutils_egquery" name="NCBI EGQuery" version="@WRAPPER_VERSION@"> <description>Provides the number of records retrieved in all Entrez databases by a single text query.</description> <macros> <import>macros.xml</import> </macros> <expand macro="requirements"/> <version_command>python egquery.py --version</version_command> <command detect_errors="aggressive" interpreter="python"><![CDATA[egquery.py "$term" @EMAIL_ARGUMENTS@ > $default]]></command> <inputs> <expand macro="dbselect"/> <param label="Search Term" name="term" type="text"> <sanitizer> <valid> <add value="'"/> <add value="["/> <add value="]"/> </valid> </sanitizer> </param> </inputs> <outputs> <data format="xml" name="default" label="EGQuery Results for $term"/> <expand macro="history_out"> <filter>use_history</filter> </expand> </outputs> <tests> <test> <param name="term" value="bacteriophage"/> <output name="default" file="egquery.1.xml" compare="contains"/> </test> </tests> <help><![CDATA[ NCBI Entrez EGQuery =================== Provides the number of records retrieved in all Entrez databases by a single text query. Example Queries --------------- +----------------------+-------------+ | Parameter | Value | +======================+=============+ | Term | Cancer | +----------------------+-------------+ @REFERENCES@ @DISCLAIMER@ ]]></help> <expand macro="citations"/> </tool>
