Mercurial > repos > iuc > ncbi_eutils_egquery

diff egquery.py @ 0:22fed2340d2b draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_entrez_eutils commit 780c9984a9c44d046aadf1e316a668d1e53aa1f0
author iuc
date Sat, 31 Oct 2015 12:45:31 -0400
parents
children 2d54a753d1f1
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/egquery.py	Sat Oct 31 12:45:31 2015 -0400
@@ -0,0 +1,20 @@
+#!/usr/bin/env python
+import argparse
+import eutils
+
+
+if __name__ == '__main__':
+    parser = argparse.ArgumentParser(description='EGQuery', epilog='')
+    parser.add_argument('term', help='Query')
+    #
+    parser.add_argument('--user_email', help="User email")
+    parser.add_argument('--admin_email', help="Admin email")
+    args = parser.parse_args()
+
+    c = eutils.Client(user_email=args.user_email, admin_email=args.admin_email)
+
+    payload = {
+        'term': args.term,
+    }
+    results = c.gquery(**payload)
+    print results