Mercurial > repos > iuc > ncbi_eutils_efetch

diff elink.py @ 3:aa88712a7536 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_entrez_eutils commit 041f11d6eb83568deda382857b121274dffe9825
author iuc
date Fri, 10 Jun 2016 14:49:12 -0400
parents 1b4ac594d02a
children 2ff5369b4b51
line wrap: on
line diff
--- a/elink.py	Thu Apr 07 17:36:34 2016 -0400
+++ b/elink.py	Fri Jun 10 14:49:12 2016 -0400
@@ -1,7 +1,8 @@
 #!/usr/bin/env python
 import argparse
+import json
+
 import eutils
-import json
 
 
 if __name__ == '__main__':
@@ -9,8 +10,8 @@
     parser.add_argument('db', help='Database to use, sometimes "none" (e.g. *check)')
     parser.add_argument('dbfrom', help='Database containing input UIDs')
     parser.add_argument('cmd', choices=['neighbor', 'neighbor_score',
-                        'neighbor_history', 'acheck', 'ncheck', 'lcheck',
-                        'llinks', 'llinkslib', 'prlinks'],
+                                        'neighbor_history', 'acheck', 'ncheck', 'lcheck',
+                                        'llinks', 'llinkslib', 'prlinks'],
                         help='ELink command mode')
     # Only used in case of neighbor_history
     parser.add_argument('--history_out', type=argparse.FileType('w'),