Mercurial > repos > iuc > ncbi_eutils_efetch

comparison macros.xml @ 6:2ff5369b4b51 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/ncbi_entrez_eutils commit a4b0969b33a68a0ea9ba12291f6694aec24f13ed
author iuc
date Tue, 30 Oct 2018 19:08:38 -0400
parents e269b3b5185b
children 779aa0f167a5
comparison
equal deleted inserted replaced
5:e269b3b5185b 6:2ff5369b4b51
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <macros> 2 <macros>
3 <token name="@WRAPPER_VERSION@">1.1</token> 3 <token name="@WRAPPER_VERSION@">1.2</token>
4 <token name="@EMAIL_ARGUMENTS@"> 4 <token name="@EMAIL_ARGUMENTS@">
5 --user_email "$__user_email__" 5 --user_email "$__user_email__"
6 #set admin_emails = ';'.join(str($__admin_users__).split(',')) 6 #set admin_emails = ';'.join(str($__admin_users__).split(','))
7 --admin_email "$admin_emails" 7 --admin_email "$admin_emails"
8 </token> 8 </token>
48 laws requires the written permission of the copyright owners. NLM 48 laws requires the written permission of the copyright owners. NLM
49 provides no legal advice concerning distribution of copyrighted 49 provides no legal advice concerning distribution of copyrighted
50 materials. Please consult your legal counsel. If you wish to do a large 50 materials. Please consult your legal counsel. If you wish to do a large
51 data mining project on PubMed data, you can enter into a licensing 51 data mining project on PubMed data, you can enter into a licensing
52 agreement and lease the data for free from NLM. For more information on 52 agreement and lease the data for free from NLM. For more information on
53 this please see `http://www.nlm.nih.gov/databases/leased.html <http://www.nlm.nih.gov/databases/leased.html>`__ 53 this please see `https://www.nlm.nih.gov/databases/download/data_distrib_main.html <https://www.nlm.nih.gov/databases/download/data_distrib_main.html>`__
54 54
55 The `full disclaimer <http://www.ncbi.nlm.nih.gov/About/disclaimer.html>`__ is available on 55 The `full disclaimer <https://www.ncbi.nlm.nih.gov/home/about/policies/>`__ is available on
56 their website 56 their website
57 57
58 Liability 58 Liability
59 ~~~~~~~~~ 59 ~~~~~~~~~
60 60
827 <citation type="bibtex">@Book{ncbiEutils, 827 <citation type="bibtex">@Book{ncbiEutils,
828 author = {Eric Sayers}, 828 author = {Eric Sayers},
829 title = {Entrez Programming Utilities Help}, 829 title = {Entrez Programming Utilities Help},
830 year = {2010}, 830 year = {2010},
831 publisher = {National Center for Biotechnology Information, Bethesda, Maryland}, 831 publisher = {National Center for Biotechnology Information, Bethesda, Maryland},
832 note = {http://ww.ncbi.nlm.nih.gov/books/NBK25500/} 832 note = {https://www.ncbi.nlm.nih.gov/books/NBK25500/}
833 }</citation> 833 }</citation>
834 </citations> 834 </citations>
835 </xml> 835 </xml>
836 <xml name="requirements"> 836 <xml name="requirements">
837 <requirements> 837 <requirements>
838 <requirement type="package" version="2.7">python</requirement> 838 <requirement type="package" version="1.68">biopython</requirement>
839 <requirement type="package" version="1.66">biopython</requirement> 839 <requirement type="package" version="1.10">six</requirement>
840 </requirements> 840 </requirements>
841 </xml> 841 </xml>
842 <xml name="linkname"> 842 <xml name="linkname">
843 <param name="linkname" type="select" label="To NCBI Database"> 843 <param name="linkname" type="select" label="To NCBI Database">
844 <!-- TODO: http://eutils.ncbi.nlm.nih.gov/entrez/query/static/entrezlinks.html --> 844 <!-- TODO: https://eutils.ncbi.nlm.nih.gov/entrez/query/static/entrezlinks.html -->
845 </param> 845 </param>
846 </xml> 846 </xml>
847 </macros> 847 </macros>