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comparison macros.xml @ 27:b7e8663db1ec draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 327834d2ea9b16f0f0264fa4e9b675a2277f2fee
author iuc
date Tue, 18 Feb 2025 23:17:45 +0000
parents 1206c725e45a
children e99aaf069191
comparison
equal deleted inserted replaced
26:1206c725e45a 27:b7e8663db1ec
1 <macros> 1 <macros>
2 <token name="@TOOL_VERSION@">1.27</token> 2 <token name="@TOOL_VERSION@">1.27</token>
3 <token name="@VERSION_SUFFIX@">1</token> 3 <token name="@VERSION_SUFFIX@">2</token>
4 <xml name="bio_tools"> 4 <xml name="bio_tools">
5 <xrefs> 5 <xrefs>
6 <xref type="bio.tools">multiqc</xref> 6 <xref type="bio.tools">multiqc</xref>
7 </xrefs> 7 </xrefs>
8 </xml> 8 </xml>
53 <![CDATA[ 53 <![CDATA[
54 #if $file_path in $file_paths 54 #if $file_path in $file_paths
55 #set $file_path += '_' + str($file_paths.count($file_path)) 55 #set $file_path += '_' + str($file_paths.count($file_path))
56 #end if 56 #end if
57 #set $file_paths += [$file_path] 57 #set $file_paths += [$file_path]
58 grep -q '$pattern' $file || die "Module '${repeat.software_cond.software}: '$pattern' not found in the file '$identifier'" && 58 grep -Pq '$pattern' $file || die "Module '${repeat.software_cond.software}: '$pattern' not found in the file '$identifier'" &&
59 ln -s '$file' '$file_path' && 59 ln -s '$file' '$file_path' &&
60 ]]></token> 60 ]]></token>
61 <token name="@CREATE_REPEAT_DIR_1@"> 61 <token name="@CREATE_REPEAT_DIR_1@">
62 <![CDATA[ 62 <![CDATA[
63 #set repeat_dir = os.path.join($software_dir, str($repeat2.type) + '_' + str($j)) 63 #set repeat_dir = os.path.join($software_dir, str($repeat2.type) + '_' + str($j))