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annotate test-data/sambamba.txt @ 30:4981b6c4f7fa draft default tip

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/multiqc commit d4b9696c6c533ca1841c22b52bb3e73833e2e0d4
author iuc
date Thu, 15 Jan 2026 20:38:43 +0000
parents 1206c725e45a
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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26
1206c725e45a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 881c4f072b1c9bd2355ba41a58e2c04d43f5ac6b
iuc
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1
1206c725e45a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 881c4f072b1c9bd2355ba41a58e2c04d43f5ac6b
iuc
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2 sambamba 1.0.1
1206c725e45a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 881c4f072b1c9bd2355ba41a58e2c04d43f5ac6b
iuc
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3 by Artem Tarasov and Pjotr Prins (C) 2012-2023
1206c725e45a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 881c4f072b1c9bd2355ba41a58e2c04d43f5ac6b
iuc
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4 LDC 1.39.0 / DMD v2.109.1 / LLVM17.0.6 / bootstrap LDC - the LLVM D compiler (1.39.0)
1206c725e45a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 881c4f072b1c9bd2355ba41a58e2c04d43f5ac6b
iuc
parents:
diff changeset
5
1206c725e45a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 881c4f072b1c9bd2355ba41a58e2c04d43f5ac6b
iuc
parents:
diff changeset
6 finding positions of the duplicate reads in the file...
1206c725e45a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 881c4f072b1c9bd2355ba41a58e2c04d43f5ac6b
iuc
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diff changeset
7 sorted 0 end pairs
1206c725e45a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 881c4f072b1c9bd2355ba41a58e2c04d43f5ac6b
iuc
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8 and 4 single ends (among them 0 unmatched pairs)
1206c725e45a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 881c4f072b1c9bd2355ba41a58e2c04d43f5ac6b
iuc
parents:
diff changeset
9 collecting indices of duplicate reads... done in 0 ms
1206c725e45a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 881c4f072b1c9bd2355ba41a58e2c04d43f5ac6b
iuc
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10 found 3 duplicates
1206c725e45a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 881c4f072b1c9bd2355ba41a58e2c04d43f5ac6b
iuc
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diff changeset
11 collected list of positions in 0 min 0 sec
1206c725e45a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 881c4f072b1c9bd2355ba41a58e2c04d43f5ac6b
iuc
parents:
diff changeset
12 marking duplicates...
1206c725e45a planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/multiqc commit 881c4f072b1c9bd2355ba41a58e2c04d43f5ac6b
iuc
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diff changeset
13 collected list of positions in 0 min 0 sec