Mercurial > repos > iuc > multigps
diff macros.xml @ 3:d78ff3764fe5 draft
Uploaded
| author | iuc |
|---|---|
| date | Mon, 03 Apr 2017 13:38:23 -0400 |
| parents | 60961854966f |
| children | 6d6ceda98d94 |
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--- a/macros.xml Mon Apr 03 11:21:10 2017 -0400 +++ b/macros.xml Mon Apr 03 13:38:23 2017 -0400 @@ -5,4 +5,22 @@ <param name="mememinw" type="integer" min="0" value="6" label="Minimum motif width for MEME" /> <param name="mememaxw" type="integer" min="0" value="16" label="Maximum motif width for MEME" /> </xml> + <xml name="label_cond_params_start"> + <param name="input" type="data" format="bam,bed,scidx" label="Run multigps on" help="Supported formats are bam, bed and scidx"> + <validator type="unspecified_build" /> + </param> + <param name="control" type="data" format="bam,bed,scidx" optional="True" label="Optional file containing reads from a control experiment" help="Must be same forat as the input above" /> + <param name="condition_name" type="text" label="Condition name" /> + </xml> + <xml name="label_cond_params_end"> + <param name="experiment_type" type="select" label="Experiment type for this replicate"> + <option value="None" selected="True">Do not set</option> + <option value="chipseq">ChIP-seq</option> + <option value="chipexo">ChIP-exo</option> + </param> + <param name="fixedreadcount" type="select" label="Use fixed per-base read count limit for this replicate?" help="Selecting No uses a global per-base limit that is estimated from a Poisson distribution."> + <option value="None" selected="True">No</option> + <option value="P">Yes</option> + </param> + </xml> </macros>
