diff macros.xml @ 3:d78ff3764fe5 draft

Uploaded
author iuc
date Mon, 03 Apr 2017 13:38:23 -0400
parents 60961854966f
children 6d6ceda98d94
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--- a/macros.xml	Mon Apr 03 11:21:10 2017 -0400
+++ b/macros.xml	Mon Apr 03 13:38:23 2017 -0400
@@ -5,4 +5,22 @@
         <param name="mememinw" type="integer" min="0" value="6" label="Minimum motif width for MEME" />
         <param name="mememaxw" type="integer" min="0" value="16" label="Maximum motif width for MEME" />
     </xml>
+    <xml name="label_cond_params_start">
+        <param name="input" type="data" format="bam,bed,scidx" label="Run multigps on" help="Supported formats are bam, bed and scidx">
+            <validator type="unspecified_build" />
+        </param>
+        <param name="control" type="data" format="bam,bed,scidx" optional="True" label="Optional file containing reads from a control experiment" help="Must be same forat as the input above" />
+        <param name="condition_name" type="text" label="Condition name" />
+    </xml>
+    <xml name="label_cond_params_end">
+        <param name="experiment_type" type="select" label="Experiment type for this replicate">
+            <option value="None" selected="True">Do not set</option>
+            <option value="chipseq">ChIP-seq</option>
+            <option value="chipexo">ChIP-exo</option>
+        </param>
+        <param  name="fixedreadcount" type="select" label="Use fixed per-base read count limit for this replicate?" help="Selecting No uses a global per-base limit that is estimated from a Poisson distribution.">
+            <option value="None" selected="True">No</option>
+            <option value="P">Yes</option>
+        </param>
+    </xml>
 </macros>