Mercurial > repos > iuc > multigps

diff multigps.xml @ 31:d40d4a18de82 draft

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author iuc
date Wed, 05 Apr 2017 11:09:08 -0400
parents 696afb27288b
children 998ebbc1f8a8
line wrap: on
line diff
--- a/multigps.xml	Wed Apr 05 10:27:56 2017 -0400
+++ b/multigps.xml	Wed Apr 05 11:09:08 2017 -0400
@@ -158,24 +158,21 @@
 #for $condition_items in $condition_repeat:
     #for $signal_items in $condition_items.signal_repeat:
         #if str($signal_items.fixedreadcount_cond.fixedreadcount_select) == 'yes':
-            #set $frc =  $signal_items.fixedreadcount_cond.fixedreadcount
+${signal_items.signal}	Signal	${signal_items.signal.ext.upper()}	${signal_items.condition_name}	${signal_items.replicate_name}	${signal_items.experiment_type}	$signal_items.fixedreadcount_cond.fixedreadcount
         #else
-            #set $frc = ''
+${signal_items.signal}	Signal	${signal_items.signal.ext.upper()}	${signal_items.condition_name}	${signal_items.replicate_name}	${signal_items.experiment_type}
         #end if
-${signal_items.signal}	Signal	${signal_items.signal.ext.upper()}	${signal_items.condition_name}	${signal_items.replicate_name}	${signal_items.experiment_type}	${frc}
     #end for
     #for $control_items in $condition_items.control_repeat:
-        #if str($control_items.specify_replicate_name_cond.specify_replicate_name) == 'yes':
-            #set $rn = $control_items.specify_replicate_name_cond.replicate_name
-        #else:
-            #set $rn = ''
+        #if str($control_items.specify_replicate_name_cond.specify_replicate_name) == 'yes' and str($control_items.fixedreadcount_cond.fixedreadcount_select) == 'yes':
+${control_items.control}	Control	${control_items.control.ext.upper()}	${control_items.condition_name}	${control_items.specify_replicate_name_cond.replicate_name}	${control_items.experiment_type}	${control_items.fixedreadcount_cond.fixedreadcount}
+        #else if str($control_items.specify_replicate_name_cond.specify_replicate_name) == 'yes' and str($control_items.fixedreadcount_cond.fixedreadcount_select) == 'no':
+${control_items.control}	Control	${control_items.control.ext.upper()}	${control_items.condition_name}	${control_items.specify_replicate_name_cond.replicate_name}	${control_items.experiment_type}
+        #else if str($control_items.specify_replicate_name_cond.specify_replicate_name) == 'no' and str($control_items.fixedreadcount_cond.fixedreadcount_select) == 'yes':
+${control_items.control}	Control	${control_items.control.ext.upper()}	${control_items.condition_name}			${control_items.experiment_type}	${control_items.fixedreadcount_cond.fixedreadcount}
+        #else if str($control_items.specify_replicate_name_cond.specify_replicate_name) == 'no' and str($control_items.fixedreadcount_cond.fixedreadcount_select) == 'no':
+${control_items.control}	Control	${control_items.control.ext.upper()}	${control_items.condition_name}			${control_items.experiment_type}
         #end if
-        #if str($control_items.fixedreadcount_cond.fixedreadcount_select) == 'yes':
-            #set $frc = $control_items.fixedreadcount_cond.fixedreadcount
-        #else:
-            #set $frc = ''
-        #end if
-${control_items.control}	Control	${control_items.control.ext.upper()}	${control_items.condition_name}	${rn}	${control_items.experiment_type}	${frc}
     #end for
 #end for
 ]]>