comparison multigps.xml @ 28:c290150f83f9 draft

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author iuc
date Wed, 05 Apr 2017 10:15:16 -0400
parents 968f95d4d13e
children 81959c058aea
comparison
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27:968f95d4d13e 28:c290150f83f9
186 <repeat name="signal_repeat" title="Signal" min="1"> 186 <repeat name="signal_repeat" title="Signal" min="1">
187 <param name="signal" type="data" format="bam,bed,scidx" label="Select signal" help="Supported formats are bam, bed and scidx"> 187 <param name="signal" type="data" format="bam,bed,scidx" label="Select signal" help="Supported formats are bam, bed and scidx">
188 <validator type="unspecified_build" /> 188 <validator type="unspecified_build" />
189 </param> 189 </param>
190 <expand macro="param_experiment_type" /> 190 <expand macro="param_experiment_type" />
191 <param name="condition_name" type="text" label="Condition name" /> 191 <param name="condition_name" type="text" optional="false" label="Condition name" />
192 <param name="replicate_name" type="text" label="Replicate name" /> 192 <param name="replicate_name" type="text" optional="false" label="Replicate name" />
193 <expand macro="cond_fixedreadcount" /> 193 <expand macro="cond_fixedreadcount" />
194 </repeat> 194 </repeat>
195 <repeat name="control_repeat" title="Control" min="0"> 195 <repeat name="control_repeat" title="Control" min="0">
196 <param name="control" type="data" format="bam,bed,scidx" label="Select control" help="Optional, supported formats are bam, bed and scidx"> 196 <param name="control" type="data" format="bam,bed,scidx" label="Select control" help="Optional, supported formats are bam, bed and scidx">
197 <validator type="unspecified_build" /> 197 <validator type="unspecified_build" />
198 </param> 198 </param>
199 <expand macro="param_experiment_type" /> 199 <expand macro="param_experiment_type" />
200 <param name="condition_name" type="text" label="Condition name" /> 200 <param name="condition_name" type="text" optional="false" label="Condition name" />
201 <conditional name="specify_replicate_name_cond"> 201 <conditional name="specify_replicate_name_cond">
202 <param name="specify_replicate_name" type="select" label="Specify replicate name?" help="Optional for control. If used, the control will only be used for the corresponding named signal replicate"> 202 <param name="specify_replicate_name" type="select" label="Specify replicate name?" help="Optional for control. If used, the control will only be used for the corresponding named signal replicate">
203 <option value="no" selected="True">No</option> 203 <option value="no" selected="True">No</option>
204 <option value="yes">Yes</option> 204 <option value="yes">Yes</option>
205 </param> 205 </param>
206 <when value="yes"> 206 <when value="yes">
207 <param name="replicate_name" type="text" optional="True" label="Replicate name"/> 207 <param name="replicate_name" type="text" optional="true" label="Replicate name"/>
208 </when> 208 </when>
209 <when value="no" /> 209 <when value="no" />
210 </conditional> 210 </conditional>
211 <expand macro="cond_fixedreadcount" /> 211 <expand macro="cond_fixedreadcount" />
212 </repeat> 212 </repeat>