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comparison multigps.xml @ 34:3a93d1903e5d draft

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Uploaded
author iuc
date Wed, 05 Apr 2017 11:25:49 -0400
parents 80a634da878d
children 76e24bd87acf
comparison
equal deleted inserted replaced
33:80a634da878d 34:3a93d1903e5d
156 <configfile name="build_design_file"> 156 <configfile name="build_design_file">
157 <![CDATA[ 157 <![CDATA[
158 #for $condition_items in $condition_repeat: 158 #for $condition_items in $condition_repeat:
159 #for $signal_items in $condition_items.signal_repeat: 159 #for $signal_items in $condition_items.signal_repeat:
160 #if str($signal_items.fixedreadcount_cond.fixedreadcount_select) == 'yes': 160 #if str($signal_items.fixedreadcount_cond.fixedreadcount_select) == 'yes':
161 ${signal_items.signal} Signal ${signal_items.signal.ext.upper()} ${signal_items.condition_name} ${signal_items.replicate_name} ${signal_items.experiment_type} $signal_items.fixedreadcount_cond.fixedreadcount 161 #set frc = $signal_items.fixedreadcount_cond.fixedreadcount
162 #else: 162 #else:
163 ${signal_items.signal} Signal ${signal_items.signal.ext.upper()} ${signal_items.condition_name} ${signal_items.replicate_name} ${signal_items.experiment_type} 163 #set frc = ''
164 #end if 164 #end if
165 ${signal_items.signal} Signal ${signal_items.signal.ext.upper()} ${signal_items.condition_name} ${signal_items.replicate_name} ${signal_items.experiment_type} ${frc}
165 #end for 166 #end for
166 #for $control_items in $condition_items.control_repeat: 167 #for $control_items in $condition_items.control_repeat:
167 #if str($control_items.specify_replicate_name_cond.specify_replicate_name) == 'yes' and str($control_items.fixedreadcount_cond.fixedreadcount_select) == 'yes': 168 #if str($control_items.specify_replicate_name_cond.specify_replicate_name) == 'yes':
168 ${control_items.control} Control ${control_items.control.ext.upper()} ${control_items.condition_name} ${control_items.specify_replicate_name_cond.replicate_name} ${control_items.experiment_type} ${control_items.fixedreadcount_cond.fixedreadcount} 169 #set rn = $control_items.specify_replicate_name_cond.replicate_name
169 #else if str($control_items.specify_replicate_name_cond.specify_replicate_name) == 'yes' and str($control_items.fixedreadcount_cond.fixedreadcount_select) == 'no': 170 #else:
170 ${control_items.control} Control ${control_items.control.ext.upper()} ${control_items.condition_name} ${control_items.specify_replicate_name_cond.replicate_name} ${control_items.experiment_type} 171 #set rn = ''
171 #else if str($control_items.specify_replicate_name_cond.specify_replicate_name) == 'no' and str($control_items.fixedreadcount_cond.fixedreadcount_select) == 'yes':
172 ${control_items.control} Control ${control_items.control.ext.upper()} ${control_items.condition_name} ${control_items.experiment_type} ${control_items.fixedreadcount_cond.fixedreadcount}
173 #else if str($control_items.specify_replicate_name_cond.specify_replicate_name) == 'no' and str($control_items.fixedreadcount_cond.fixedreadcount_select) == 'no':
174 ${control_items.control} Control ${control_items.control.ext.upper()} ${control_items.condition_name} ${control_items.experiment_type}
175 #end if 172 #end if
173 #if str($control_items.fixedreadcount_cond.fixedreadcount_select) == 'yes':
174 #set frc $control_items.fixedreadcount_cond.fixedreadcount
175 #else:
176 #set frc = ''
177 #end if
178 ${control_items.control} Control ${control_items.control.ext.upper()} ${control_items.condition_name} ${rn} ${control_items.experiment_type} ${frc}
176 #end for 179 #end for
177 #end for 180 #end for
178 ]]> 181 ]]>
179 </configfile> 182 </configfile>
180 </configfiles> 183 </configfiles>