Mercurial > repos > iuc > mothur_trim_flows

diff trim.flows.xml @ 5:40d7b488661e draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit 38a2bbee32eaaceeb22d7549b13dbc0c613ee173
author iuc
date Tue, 20 Mar 2018 13:39:18 -0400
parents 5c31047be933
children
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--- a/trim.flows.xml	Wed Feb 14 11:39:09 2018 -0500
+++ b/trim.flows.xml	Tue Mar 20 13:39:18 2018 -0400
@@ -72,6 +72,7 @@
             <option value="I"> I </option>
         </param>
         <param name="fasta" type="boolean" truevalue="true" falsevalue="false" checked="false" label="fasta - translate the flowgram data to fasta sequence format"/>
+        <expand macro="param-savelog"/>
     </inputs>
     <outputs>
         <expand macro="logfile-output"/>
@@ -96,6 +97,7 @@
                     <has_text text="flow"/>
                 </assert_contents>
             </output>
+            <param name="savelog" value="true"/>
             <expand macro="logfile-test"/>
         </test>
         <test><!-- test with oligos file and fasta output -->
@@ -117,6 +119,7 @@
                 <element name="F003D006" md5="5ea6613d7aa26f87ca9b983152e14a4b" ftype="mothur.sff.flow"/>
             </output_collection>
             <output name="flow_fasta" md5="0725967a9ed731c049d48ea876b0e308" ftype="fasta"/>
+            <param name="savelog" value="true"/>
             <expand macro="logfile-test"/>
         </test>
     </tests>