Mercurial > repos > iuc > mothur_summary_qual

comparison summary.qual.xml @ 5:5ff676aa0986 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit 38a2bbee32eaaceeb22d7549b13dbc0c613ee173
author iuc
date Tue, 20 Mar 2018 13:56:52 -0400
parents 30b226ea4888
children
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4:64b2dc49c0ae 5:5ff676aa0986
29 ]]></command> 29 ]]></command>
30 <inputs> 30 <inputs>
31 <param name="qfile" type="data" format="qual" label="qfile - Sequence Quality file"/> 31 <param name="qfile" type="data" format="qual" label="qfile - Sequence Quality file"/>
32 <param name="name" type="data" format="mothur.names" optional="true" label="name - Names"/> 32 <param name="name" type="data" format="mothur.names" optional="true" label="name - Names"/>
33 <param name="count" type="data" format="mothur.count_table" optional="true" label="count - a count_table" help="generated by count.seqs"/> 33 <param name="count" type="data" format="mothur.count_table" optional="true" label="count - a count_table" help="generated by count.seqs"/>
34 <expand macro="param-savelog"/>
34 </inputs> 35 </inputs>
35 <outputs> 36 <outputs>
36 <expand macro="logfile-output"/> 37 <expand macro="logfile-output"/>
37 <data name="out_summary" format="mothur.summary" from_work_dir="qfile*.summary" label="${tool.name} on ${on_string}: summary"/> 38 <data name="out_summary" format="mothur.summary" from_work_dir="qfile*.summary" label="${tool.name} on ${on_string}: summary"/>
38 </outputs> 39 </outputs>
39 <tests> 40 <tests>
40 <test> 41 <test>
41 <param name="qfile" value="Mock_S280_L001_R1_001_small.trim.contigs.qual"/> 42 <param name="qfile" value="Mock_S280_L001_R1_001_small.trim.contigs.qual"/>
42 <output name="out_summary" md5="04de7c9d0f3889d5e121db9d9070c935"/> 43 <output name="out_summary" md5="04de7c9d0f3889d5e121db9d9070c935"/>
44 <param name="savelog" value="true"/>
43 <expand macro="logfile-test"/> 45 <expand macro="logfile-test"/>
44 </test> 46 </test>
45 </tests> 47 </tests>
46 <help><![CDATA[ 48 <help><![CDATA[
47 49