Mercurial > repos > iuc > mothur_split_groups

comparison split.groups.xml @ 4:7b20827f8e8f draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit 38a2bbee32eaaceeb22d7549b13dbc0c613ee173
author iuc
date Tue, 20 Mar 2018 14:14:32 -0400
parents 883a95e17395
children
comparison
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3:883a95e17395 4:7b20827f8e8f
40 <options> 40 <options>
41 <filter type="data_meta" ref="group" key="groups"/> 41 <filter type="data_meta" ref="group" key="groups"/>
42 </options> 42 </options>
43 </param> 43 </param>
44 <param name="count" type="data" format="mothur.count_table" optional="true" label="count - a count_table" help="generated by count.seqs"/> 44 <param name="count" type="data" format="mothur.count_table" optional="true" label="count - a count_table" help="generated by count.seqs"/>
45 <expand macro="param-savelog"/>
45 </inputs> 46 </inputs>
46 <outputs> 47 <outputs>
47 <expand macro="logfile-output"/> 48 <expand macro="logfile-output"/>
48 <collection name="groupfastas" type="list" label="${tool.name} on ${on_string}: fasta per group"> 49 <collection name="groupfastas" type="list" label="${tool.name} on ${on_string}: fasta per group">
49 <!-- TODO: format_source on discovered collection elements doesn't seem to work yet, change to format_source="fasta" once it does --> 50 <!-- TODO: format_source on discovered collection elements doesn't seem to work yet, change to format_source="fasta" once it does -->
56 <param name="group" value="amazon.groups" ftype="mothur.groups"/> 57 <param name="group" value="amazon.groups" ftype="mothur.groups"/>
57 <output_collection name="groupfastas" count="2"> 58 <output_collection name="groupfastas" count="2">
58 <element name="pasture" md5="3844bc02ec09acbbf31845ea6ac6632d" ftype="fasta"/> 59 <element name="pasture" md5="3844bc02ec09acbbf31845ea6ac6632d" ftype="fasta"/>
59 <element name="forest" md5="f0e662d1d82e96b4977864925493dbf5" ftype="fasta"/> 60 <element name="forest" md5="f0e662d1d82e96b4977864925493dbf5" ftype="fasta"/>
60 </output_collection> 61 </output_collection>
62 <param name="savelog" value="true"/>
61 <expand macro="logfile-test"/> 63 <expand macro="logfile-test"/>
62 </test> 64 </test>
63 </tests> 65 </tests>
64 <help><![CDATA[ 66 <help><![CDATA[
65 67