Mercurial > repos > iuc > mothur_remove_dists

comparison remove.dists.xml @ 7:6a4feed29ebc draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit 38a2bbee32eaaceeb22d7549b13dbc0c613ee173
author iuc
date Tue, 20 Mar 2018 14:09:58 -0400
parents 9067f78ae9bd
children
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6:2265a5adb0d9 7:6a4feed29ebc
37 <when value="phylip"> 37 <when value="phylip">
38 <param name="dist" argument="phylip" type="data" format="mothur.dist,mothur.lower.dist,mothur.square.dist" label="phylip - Distance Matrix"/> 38 <param name="dist" argument="phylip" type="data" format="mothur.dist,mothur.lower.dist,mothur.square.dist" label="phylip - Distance Matrix"/>
39 </when> 39 </when>
40 </conditional> 40 </conditional>
41 <param argument="accnos" type="data" format="mothur.accnos" label="accnos - sort" help="format must be mothur.accnos"/> 41 <param argument="accnos" type="data" format="mothur.accnos" label="accnos - sort" help="format must be mothur.accnos"/>
42 <expand macro="param-savelog"/>
42 </inputs> 43 </inputs>
43 <outputs> 44 <outputs>
44 <expand macro="logfile-output"/> 45 <expand macro="logfile-output"/>
45 <data name="pick_dist" format_source="dist" from_work_dir="input_dist*.pick.dat" label="${tool.name} on ${on_string}: pick.dist"/> 46 <data name="pick_dist" format_source="dist" from_work_dir="input_dist*.pick.dat" label="${tool.name} on ${on_string}: pick.dist"/>
46 </outputs> 47 </outputs>
54 <expand macro="test-dist-format"/> 55 <expand macro="test-dist-format"/>
55 <has_text text="U68589"/> 56 <has_text text="U68589"/>
56 <has_line_matching expression="^90$"/> 57 <has_line_matching expression="^90$"/>
57 </assert_contents> 58 </assert_contents>
58 </output> 59 </output>
60 <param name="savelog" value="true"/>
59 <expand macro="logfile-test"/> 61 <expand macro="logfile-test"/>
60 </test> 62 </test>
61 </tests> 63 </tests>
62 <help><![CDATA[ 64 <help><![CDATA[
63 65