Mercurial > repos > iuc > mothur_merge_groups

diff merge.groups.xml @ 5:a681637e47bb draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit 38a2bbee32eaaceeb22d7549b13dbc0c613ee173
author iuc
date Tue, 20 Mar 2018 13:34:22 -0400
parents 8ae8f906cfe9
children
line wrap: on
line diff
--- a/merge.groups.xml	Wed Feb 14 11:40:50 2018 -0500
+++ b/merge.groups.xml	Tue Mar 20 13:34:22 2018 -0400
@@ -100,6 +100,7 @@
                 </repeat>
             </when>
         </conditional>
+        <expand macro="param-savelog"/>
     </inputs>
     <outputs>
         <expand macro="logfile-output"/>
@@ -116,6 +117,7 @@
             <param name="source" value="hist"/>
             <param name="design_dataset" value="toymothur.design2"/>
             <output name="merged_shared" md5="60f9e715c948911a61986bf1d1db7747" ftype="mothur.shared"/>
+            <param name="savelog" value="true"/>
             <expand macro="logfile-test"/>
         </test>
         <test><!-- test with shared file and label and group select -->
@@ -125,6 +127,7 @@
             <param name="source" value="hist"/>
             <param name="design_dataset" value="toymothur.design2"/>
             <output name="merged_shared" md5="11818d535bf88938dc063afca3f95b23" ftype="mothur.shared"/>
+            <param name="savelog" value="true"/>
             <expand macro="logfile-test"/>
         </test>
         <test><!-- test with group file -->
@@ -132,6 +135,7 @@
             <param name="source" value="hist"/>
             <param name="design_dataset" value="toymothur.design2"/>
             <output name="merged_group" md5="023ebd0668522e9531da5b061e6e9137" ftype="mothur.groups"/>
+            <param name="savelog" value="true"/>
             <expand macro="logfile-test"/>
         </test>
         <test><!-- test with count table and fasta file -->
@@ -147,6 +151,7 @@
                     <has_text text="dalek"/>
                 </assert_contents>
             </output>
+            <param name="savelog" value="true"/>
             <expand macro="logfile-test"/>
         </test>
         <test><!-- test with design creation -->
@@ -161,6 +166,7 @@
                 <param name="groups" value="pasture"/>
             </repeat>
             <output name="merged_shared" md5="60f9e715c948911a61986bf1d1db7747" ftype="mothur.shared"/>
+            <param name="savelog" value="true"/>
             <expand macro="logfile-test"/>
         </test>
     </tests>