Mercurial > repos > iuc > mothur_make_design
diff make.design.xml @ 3:e98fb3b14c12 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit 4648c7574a78601e03ae6a318cbcd5b492a8a9f4
| author | iuc |
|---|---|
| date | Wed, 14 Feb 2018 10:07:16 -0500 |
| parents | 840ac4688cf5 |
| children | 717ab045706c |
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--- a/make.design.xml Tue Sep 05 16:06:55 2017 -0400 +++ b/make.design.xml Wed Feb 14 10:07:16 2018 -0500 @@ -7,16 +7,16 @@ <expand macro="stdio"/> <expand macro="version_command"/> <command><![CDATA[ - @SHELL_OPTIONS@ +@SHELL_OPTIONS@ - #for $grouping in $groupings: - #set grp_str = $grouping.groups.__str__ - #if grp_str: - #for $grp in grp_str.split(','): - echo -e "$grp\t$grouping.name" >> $design; - #end for - #end if +#for $grouping in $groupings: + #set grp_str = $grouping.groups.__str__ + #if grp_str: + #for $grp in grp_str.split(','): + echo -e "$grp\t$grouping.name" >> $design; #end for + #end if +#end for ]]></command> <inputs> <param name="source" type="data" format="mothur.shared,mothur.groups" label="Source containing groups"/> @@ -46,8 +46,7 @@ <output name="design" file="toymothur.design" ftype="mothur.design"/> </test> </tests> - <help> -<![CDATA[ + <help><![CDATA[ @MOTHUR_OVERVIEW@ @@ -59,7 +58,7 @@ .. _merge.groups: https://www.mothur.org/wiki/Merge.groups .. _indicator: https://www.mothur.org/wiki/Indicator .. _metastats: https://www.mothur.org/wiki/Metastats -]]> - </help> + + ]]></help> <expand macro="citations"/> </tool>