Mercurial > repos > iuc > mothur_make_biom

diff make.biom.xml @ 6:063d478e1c94 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit 38a2bbee32eaaceeb22d7549b13dbc0c613ee173
author: iuc
date: Tue, 20 Mar 2018 14:06:55 -0400
parents: 9da0a5f7df8c
--- a/make.biom.xml	Wed Feb 14 11:34:51 2018 -0500
+++ b/make.biom.xml	Tue Mar 20 14:06:55 2018 -0400
@@ -69,6 +69,7 @@
         <param name="label" type="select" optional="true" multiple="true" label="label - Select OTU Labels to include" help="By default all are included if no selection is made">
             <expand macro="labeloptions"/>
         </param>
+        <expand macro="param-savelog"/>
     </inputs>
     <outputs>
         <expand macro="logfile-output"/>
@@ -89,6 +90,7 @@
                     </assert_contents>
                 </element>
             </output_collection>
+            <param name="savelog" value="true"/>
             <expand macro="logfile-test"/>
         </test>
         <test><!-- test with subset of labels and groups-->
@@ -105,6 +107,7 @@
                     </assert_contents>
                 </element>
             </output_collection>
+            <param name="savelog" value="true"/>
             <expand macro="logfile-test"/>
         </test>
         <test><!-- test with constaxonomy and metadata -->
@@ -120,6 +123,7 @@
                     </assert_contents>
                 </element>
             </output_collection>
+            <param name="savelog" value="true"/>
             <expand macro="logfile-test"/>
         </test>
         <!-- TODO: test with picrust option (need file with greengenes OTU IDs) -->