Mercurial > repos > iuc > mothur_heatmap_sim

comparison heatmap.sim.xml @ 5:861d4d4458e9 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit 38a2bbee32eaaceeb22d7549b13dbc0c613ee173
author iuc
date Tue, 20 Mar 2018 13:59:33 -0400
parents eb3fcb541aad
children
comparison
equal deleted inserted replaced
4:7ed6ae2912cb 5:861d4d4458e9
85 <param name="dist" type="data" format="mothur.dist,mothur.lower.dist,mothur.square.dist" label="phylip - Distance Matrix"/> 85 <param name="dist" type="data" format="mothur.dist,mothur.lower.dist,mothur.square.dist" label="phylip - Distance Matrix"/>
86 </when> 86 </when>
87 </conditional> 87 </conditional>
88 <param name="fontsize" type="integer" value="24" min="0" max="100" label="fontsize - Fontsize (default is 24)"/> 88 <param name="fontsize" type="integer" value="24" min="0" max="100" label="fontsize - Fontsize (default is 24)"/>
89 <param name="count" type="data" format="mothur.count_table" optional="true" label="count - a count table" help="generated by count.seqs"/> 89 <param name="count" type="data" format="mothur.count_table" optional="true" label="count - a count table" help="generated by count.seqs"/>
90 <expand macro="param-savelog"/>
90 </inputs> 91 </inputs>
91 <outputs> 92 <outputs>
92 <expand macro="logfile-output"/> 93 <expand macro="logfile-output"/>
93 <data name="heatmap" format="svg" from_work_dir="input_dist*.heatmap.sim.svg" label="${tool.name} on ${on_string}: heatmap.sim.svg"> 94 <data name="heatmap" format="svg" from_work_dir="input_dist*.heatmap.sim.svg" label="${tool.name} on ${on_string}: heatmap.sim.svg">
94 <filter>input['source'] != 'shared'</filter> 95 <filter>input['source'] != 'shared'</filter>
107 <has_text text="svg xmlns:svg="/> 108 <has_text text="svg xmlns:svg="/>
108 <has_text text="Heatmap for"/> 109 <has_text text="Heatmap for"/>
109 <has_text text="U68640"/> 110 <has_text text="U68640"/>
110 </assert_contents> 111 </assert_contents>
111 </output> 112 </output>
113 <param name="savelog" value="true"/>
112 <expand macro="logfile-test"/> 114 <expand macro="logfile-test"/>
113 </test> 115 </test>
114 <test> 116 <test>
115 <param name="source" value="shared"/> 117 <param name="source" value="shared"/>
116 <param name="otu" value="amazon.an.shared" ftype="mothur.shared"/> 118 <param name="otu" value="amazon.an.shared" ftype="mothur.shared"/>
120 <has_text text="svg xmlns:svg="/> 122 <has_text text="svg xmlns:svg="/>
121 <has_text text="Heatmap at distance 0.55"/> 123 <has_text text="Heatmap at distance 0.55"/>
122 </assert_contents> 124 </assert_contents>
123 </element> 125 </element>
124 </output_collection> 126 </output_collection>
127 <param name="savelog" value="true"/>
125 <expand macro="logfile-test"/> 128 <expand macro="logfile-test"/>
126 </test> 129 </test>
127 <test> 130 <test>
128 <param name="source" value="shared"/> 131 <param name="source" value="shared"/>
129 <param name="otu" value="amazon.an.shared" ftype="mothur.shared"/> 132 <param name="otu" value="amazon.an.shared" ftype="mothur.shared"/>
136 <has_text text="svg xmlns:svg="/> 139 <has_text text="svg xmlns:svg="/>
137 <has_text text="Heatmap at distance 0.03"/> 140 <has_text text="Heatmap at distance 0.03"/>
138 </assert_contents> 141 </assert_contents>
139 </element> 142 </element>
140 </output_collection> 143 </output_collection>
144 <param name="savelog" value="true"/>
141 <expand macro="logfile-test"/> 145 <expand macro="logfile-test"/>
142 </test> 146 </test>
143 </tests> 147 </tests>
144 <help><![CDATA[ 148 <help><![CDATA[
145 149