Mercurial > repos > iuc > mothur_get_seqs
diff get.seqs.xml @ 5:130711597b24 draft
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit 38a2bbee32eaaceeb22d7549b13dbc0c613ee173
| author | iuc |
|---|---|
| date | Tue, 20 Mar 2018 13:32:52 -0400 |
| parents | ef6de2793ab6 |
| children |
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--- a/get.seqs.xml Wed Feb 14 11:21:58 2018 -0500 +++ b/get.seqs.xml Tue Mar 20 13:32:52 2018 -0400 @@ -68,6 +68,7 @@ <param name="list_in" type="data" format="mothur.list" optional="true" label="list - OTU List"/> <param name="taxonomy_in" type="data" format="mothur.seq.taxonomy" optional="true" label="taxonomy - Taxonomy"/> <param name="dups" type="boolean" truevalue="dups" falsevalue="false" checked="true" label="dups - Apply to duplicates"/> + <expand macro="param-savelog"/> </inputs> <outputs> <expand macro="logfile-output"/> @@ -105,12 +106,14 @@ <param name="fasta_in" value="Mock_S280_L001_R1_001_small.trim.contigs.fasta"/> <param name="dups" value=""/> <output name="fasta_out" md5="f9335b6b70dc639e420d33809e51431d"/> + <param name="savelog" value="true"/> <expand macro="logfile-test"/> </test> <test> <param name="accnos" value="Mock_S280_L001_R1_001_small.trim.contigs.bad.accnos"/> <param name="fastq_in" value="Mock_S280_L001_R1_001_small.fastq"/> <output name="fastq_out" md5="81d026f969e15b8c8701f8dc5f3a6904"/> + <param name="savelog" value="true"/> <expand macro="logfile-test"/> </test> <test> @@ -121,12 +124,14 @@ <param name="dups" value="false"/> <output name="fasta_out" md5="f9335b6b70dc639e420d33809e51431d"/> <output name="fastq_out" md5="81d026f969e15b8c8701f8dc5f3a6904"/> + <param name="savelog" value="true"/> <expand macro="logfile-test"/> </test> <test> <param name="accnos" value="amazon.bad.accnos"/> <param name="count_in" value="amazon.count_table"/> <output name="count_out" md5="6892dd99850ce9e9f8f15e77b28f57e2"/> + <param name="savelog" value="true"/> <expand macro="logfile-test"/> </test> </tests>
