Mercurial > repos > iuc > mothur_get_oturep

diff get.oturep.xml @ 5:2ac0e471b97a draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit 38a2bbee32eaaceeb22d7549b13dbc0c613ee173
author iuc
date Tue, 20 Mar 2018 13:55:52 -0400
parents 899ef1660676
children
line wrap: on
line diff
--- a/get.oturep.xml	Wed Feb 14 12:03:33 2018 -0500
+++ b/get.oturep.xml	Tue Mar 20 13:55:52 2018 -0400
@@ -131,6 +131,7 @@
             <option value="size">Bin Size</option>
             <option value="group">Group</option>
         </param>
+        <expand macro="param-savelog"/>
     </inputs>
     <outputs>
         <expand macro="logfile-output"/>
@@ -161,6 +162,7 @@
             <output_collection name="names_out" count="36">
                 <element name="0.27" md5="39ff2858909d49633871d5a625585de5" ftype="mothur.names"/>
             </output_collection>
+            <param name="savelog" value="true"/>
             <expand macro="logfile-test"/>
         </test>
         <!-- test with distance / column / label select -->
@@ -174,6 +176,7 @@
             <output_collection name="names_out" count="4">
                 <element name="0.27" md5="be6dccdd3d4619c3ac465246c826209a" ftype="mothur.names"/>
             </output_collection>
+            <param name="savelog" value="true"/>
             <expand macro="logfile-test"/>
         </test>
         <!-- test with distance / fasta / sorting -->
@@ -191,6 +194,7 @@
             <output_collection name="fasta_out" count="2">
                 <element name="0.27" md5="a9d9622b6f5fcbe8acdc05df5484ffc4" ftype="fasta"/>
             </output_collection>
+            <param name="savelog" value="true"/>
             <expand macro="logfile-test"/>
         </test>
         <!-- test with distance / group file -->
@@ -207,6 +211,7 @@
             <output_collection name="names_out" count="8">
                 <element name="0.27.pasture" md5="34f87d93fd9ebbefed9754f627f502fd" ftype="mothur.names"/>
             </output_collection>
+            <param name="savelog" value="true"/>
             <expand macro="logfile-test"/>
         </test>
         <!-- test with distance / count table -->
@@ -220,6 +225,7 @@
             <output_collection name="count_out" count="3">
                 <element name="0.27" md5="6b1afd712825af4bf8cb4ab8304df903" ftype="mothur.count_table"/>
             </output_collection>
+            <param name="savelog" value="true"/>
             <expand macro="logfile-test"/>
         </test>
         <!-- test with abundance / count / label -->
@@ -237,6 +243,7 @@
                     </assert_contents>
                 </element>
             </output_collection>
+            <param name="savelog" value="true"/>
             <expand macro="logfile-test"/>
         </test>
     </tests>