Mercurial > repos > iuc > mothur_get_oturep

diff README @ 1:17b63c3cc04d draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit ea40e3d84e7850eb4226d6c85f709dcad18d4ba9
author iuc
date Thu, 18 May 2017 18:09:47 -0400
parents d568050a95be
children
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--- a/README	Fri Jun 24 16:33:26 2016 -0400
+++ b/README	Thu May 18 18:09:47 2017 -0400
@@ -4,8 +4,11 @@
 	- Provides Mothur wrappers for the Mothur tools
 	- Downloads and builds Mothur and all its dependencies on the Linux or Mac operating system
 
-Requirements:
-	- Build utilities (make, GCC, gfortran, etc)
+Installing Tools via the API:
+This is a rather large tool suite, if you are having problems installing via the toolshed, try using the API instead
+    - Install ephemeris: pip install ephemeris -U
+    - Use ephemeris to install tools: shed_install -a <your admin API key> -t tools.yaml
+    - (You can find a tools.yaml you can use in this repo as well)
 
 Installing reference data from silva and greengenes:
     - There is a Galaxy datamanager for available for Mothur