Mercurial > repos > iuc > mothur_degap_seqs

comparison degap.seqs.xml @ 5:2f615bc86373 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/mothur commit 38a2bbee32eaaceeb22d7549b13dbc0c613ee173
author iuc
date Tue, 20 Mar 2018 13:33:16 -0400
parents de6d0eaca0ed
children
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4:ac10714d3528 5:2f615bc86373
19 | mothur 19 | mothur
20 | tee mothur.out.log 20 | tee mothur.out.log
21 ]]></command> 21 ]]></command>
22 <inputs> 22 <inputs>
23 <param name="fasta" type="data" format="fasta" label="fasta - Dataset"/> 23 <param name="fasta" type="data" format="fasta" label="fasta - Dataset"/>
24 <expand macro="param-savelog"/>
24 </inputs> 25 </inputs>
25 <outputs> 26 <outputs>
26 <expand macro="logfile-output"/> 27 <expand macro="logfile-output"/>
27 <data name="out_fasta" format_source="fasta" from_work_dir="fasta*.ng.fasta" label="${tool.name} on ${on_string}: fasta"/> 28 <data name="out_fasta" format_source="fasta" from_work_dir="fasta*.ng.fasta" label="${tool.name} on ${on_string}: fasta"/>
28 </outputs> 29 </outputs>
29 <tests> 30 <tests>
30 <test> 31 <test>
31 <param name="fasta" value="Mock_S280_L001_R1_001_small.trim.contigs.good.align_head"/> 32 <param name="fasta" value="Mock_S280_L001_R1_001_small.trim.contigs.good.align_head"/>
32 <output name="out_fasta" file="Mock_S280_L001_R1_001_small.trim.contigs.good.ng.fasta"/> 33 <output name="out_fasta" file="Mock_S280_L001_R1_001_small.trim.contigs.good.ng.fasta"/>
34 <param name="savelog" value="true"/>
33 <expand macro="logfile-test"/> 35 <expand macro="logfile-test"/>
34 </test> 36 </test>
35 </tests> 37 </tests>
36 <help> 38 <help>
37 <![CDATA[ 39 <![CDATA[