# HG changeset patch
# User iuc
# Date 1629978300 0
# Node ID c5a630b993f95108ab41ed394d1769aa8e700b5d
# Parent  9e1bdd260c4768c00ca05d2f36ade55da2bdb73e
"planemo upload for repository https://github.com/sunnyisgalaxy/moabs commit fc88d03b9c6c57265820c718d754817d3fb9e7d8"

diff -r 9e1bdd260c47 -r c5a630b993f9 moabs.xml
--- a/moabs.xml	Sat Apr 11 08:14:08 2020 +0000
+++ b/moabs.xml	Thu Aug 26 11:45:00 2021 +0000
@@ -287,7 +287,7 @@
         </collection>
     </outputs>
     <tests>
-        <test>
+        <test expect_num_outputs="5">
             <!-- test single-end reads -->
             <param name="reference_source_selector" value="history"/>
             <param name="ref_file" ftype="fasta" value="chr11.fa"/>
@@ -339,7 +339,7 @@
                 <element name="g2.G.bed" file="SE_g2.G.bed" ftype="interval" lines_diff="1"/>
             </output_collection>
         </test>
-        <test>
+        <test expect_num_outputs="3">
             <!-- test paired-end reads -->
             <param name="reference_source_selector" value="history"/>
             <param name="ref_file" ftype="fasta" value="seg.fa"/>
@@ -371,7 +371,7 @@
             <output name="output2" file="PE_dmr_M2_g1.G.bed_vs_g2.G.bed.txt" ftype="interval" lines_diff="1"/>
             <output name="output3" file="PE_comp.g1.vs.g2.txt" ftype="interval" lines_diff="1"/>
         </test>
-        <test>
+        <test expect_num_outputs="3">
             <!-- test paired collection -->
             <param name="reference_source_selector" value="history"/>
             <param name="ref_file" ftype="fasta" value="seg.fa"/>
@@ -411,7 +411,7 @@
             <output name="output2" file="PE_dmr_M2_g1.G.bed_vs_g2.G.bed.txt" ftype="interval" lines_diff="1"/>
             <output name="output3" file="PE_comp.g1.vs.g2.txt" ftype="interval" lines_diff="1"/>
         </test>
-        <test>
+        <test expect_num_outputs="3">
             <!-- test data table reference -->
             <param name="reference_source_selector" value="cached"/>
             <param name="ref_file" value="chr11"/>
diff -r 9e1bdd260c47 -r c5a630b993f9 test-data/SE_g1_r1.bam
Binary file test-data/SE_g1_r1.bam has changed
diff -r 9e1bdd260c47 -r c5a630b993f9 test-data/SE_g1_r2.bam
Binary file test-data/SE_g1_r2.bam has changed
diff -r 9e1bdd260c47 -r c5a630b993f9 test-data/SE_g2_r1.bam
Binary file test-data/SE_g2_r1.bam has changed
diff -r 9e1bdd260c47 -r c5a630b993f9 test-data/SE_g2_r2.bam
Binary file test-data/SE_g2_r2.bam has changed