Mercurial > repos > iuc > mirnature
annotate test-data/test_mirbase.txt @ 0:d2775bf857d6 draft default tip
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
| author | iuc |
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| date | Sun, 11 Dec 2022 22:27:56 +0000 |
| parents | |
| children |
| rev | line source |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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1 |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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2 .__________________________________________________________________________. |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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3 | | |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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4 |________________________________________________.........---------........| |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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5 .--. . . . . ._________________________. |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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6 o | )|\ | / \ _|_ | | |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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7 .--.--. . |--' | \ | /___\ | . . .--..-. |........---------........| |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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8 | | | | | \ | \| / \ | | | | (.-' ._______. ._______. |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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9 ' ' `--' `-' `' '' ``-'`--`-' `--' |.......| |.......| |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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10 Computational detection of microRNA candidates |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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11 v.1.1 Sept 21th, 2022 |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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12 Cristian A. Velandia-Huerto, Jöerg Fallmann, Peter F. Stadler |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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13 Bioinformatics Leipzig |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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14 University of Leipzig |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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15 |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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16 [2m[34m[PROCESS] Generating a carbon-copy of your Unsd genome |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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17 [0m[0m[1m[32m[RESULT] I am ready to run miRNAture |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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18 [0m[0m[2m[34m[PROCESS] The dataset_16.dat covariance list is correctly defined |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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19 [0m[0m[2m[34m[PROCESS] Processing: dataset_16.dat models on Unknown_species genome |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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20 [0m[0m[2m[34m[PROCESS] Running Mode: mirbase searches |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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21 [0m[0m[2m[34m[PROCESS] Merging candidates on mirbase |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
|
22 [0m[0m[2m[34m[PROCESS] The dataset_16.dat covariance list is correctly defined |
|
d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
|
23 [0m[0m[2m[34m[PROCESS] Processing: dataset_16.dat models on Unknown_species genome |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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24 [0m[0m[2m[34m[PROCESS] Merging candidates on final |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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25 [0m[0m[2m[34m[PROCESS] Refining final candidates on Unsd |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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26 [0m[0m[1m[32m[RESULT] Detected homology candidates by mirbase mode |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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27 [0m[0m[2m[34m[PROCESS] Cleaning temporal files... |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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28 [0m[0m[1m[97m[END] |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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29 -¿Olvida usted algo?- |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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30 ¡Ojalá!. |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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31 |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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32 El emigrante. Luis Felipe Lornelí. (2005) |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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33 |
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d2775bf857d6
planemo upload for repository https://github.com/Bierinformatik/miRNAture commit 9e4e624a3a486cbd805bc3beb00e9903f315efe0
iuc
parents:
diff
changeset
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34 [0m[0m |