# HG changeset patch
# User iuc
# Date 1617394817 0
# Node ID fc4141fec0c2bdb15aba104ffd7a5c5c3ff6e7d8
# Parent  1c0f4a5f73f038f05df39b918e8d0792effae266
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/miniasm commit 5b819c9a19a38ebdd60bcd0ea3f530bf60a688bb"

diff -r 1c0f4a5f73f0 -r fc4141fec0c2 miniasm.xml
--- a/miniasm.xml	Thu Sep 03 16:19:55 2020 +0000
+++ b/miniasm.xml	Fri Apr 02 20:20:17 2021 +0000
@@ -1,4 +1,4 @@
-<tool id="miniasm" name="miniasm" version="@TOOL_VERSION@+galaxy0">
+<tool id="miniasm" name="miniasm" version="@TOOL_VERSION@+galaxy1">
     <description>Ultrafast de novo assembly for long noisy reads </description>
     <macros>
         <token name="@TOOL_VERSION@">0.3</token>
@@ -25,7 +25,7 @@
 '$paf' > '$gfa'
     ]]></command>
     <inputs>
-        <param name="readFile" type="data" format="fastq,fasta" label="Sequence Reads" />
+        <param name="readFile" type="data" format="fastq,fastq.gz,fasta,fasta.gz" label="Sequence Reads" />
         <param name="paf" type="data" format="tabular" label="PAF file" help="Pairwise mapping format" />
         <section name="preselection" title="Preselection options">
             <param argument="-m" name="minMatch" type="integer" value="100" label="Drop mappings having less than this number of matching bases"
@@ -65,7 +65,7 @@
             <output name="gfa" file="mini_reads.gfa"/>
         </test>
         <test>
-            <param name="readFile" value="mini_reads.fq"/>
+            <param name="readFile" value="mini_reads.fq.gz"/>
             <param name="minMatch" value="99"/>
             <param name="minIden" value="0.04"/>
             <param name="minSpan" value="999"/>
diff -r 1c0f4a5f73f0 -r fc4141fec0c2 test-data/mini_reads.fq.gz
Binary file test-data/mini_reads.fq.gz has changed