Mercurial > repos > iuc > metaphlan

annotate test-data/test_database_versioned.loc.test @ 11:75c7ed7d4ff2 draft

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planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/metaphlan/ commit e567b31e44ef8525e6667b37480b6f1b599224b9
author iuc
date Fri, 21 Feb 2025 21:28:59 +0000
parents 1416b7c401a3
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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1416b7c401a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/metaphlan/ commit 671a5fc6d4c02bd3eb830c1886a31ecffd134ceb
iuc
parents:
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1 # Tab separated with 5 columns:
1416b7c401a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/metaphlan/ commit 671a5fc6d4c02bd3eb830c1886a31ecffd134ceb
iuc
parents:
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2 # - value (Galaxy records this in the Galaxy DB)
1416b7c401a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/metaphlan/ commit 671a5fc6d4c02bd3eb830c1886a31ecffd134ceb
iuc
parents:
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3 # - name (Galaxy shows this in the UI)
1416b7c401a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/metaphlan/ commit 671a5fc6d4c02bd3eb830c1886a31ecffd134ceb
iuc
parents:
diff changeset
4 # - dbkey
1416b7c401a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/metaphlan/ commit 671a5fc6d4c02bd3eb830c1886a31ecffd134ceb
iuc
parents:
diff changeset
5 # - path (folder name containing the Kraken DB)
1416b7c401a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/metaphlan/ commit 671a5fc6d4c02bd3eb830c1886a31ecffd134ceb
iuc
parents:
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6 # - db version (whether it is SGB of Metaphlan v4 or not)
1416b7c401a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/metaphlan/ commit 671a5fc6d4c02bd3eb830c1886a31ecffd134ceb
iuc
parents:
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7 test-db-20210409 "Test Database" test-db ${__HERE__}/test-db SGB
1416b7c401a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/metaphlan/ commit 671a5fc6d4c02bd3eb830c1886a31ecffd134ceb
iuc
parents:
diff changeset
8 # the TOY DB should be called in tests with the hidden test parameter enables this will make Metaphlan
1416b7c401a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/metaphlan/ commit 671a5fc6d4c02bd3eb830c1886a31ecffd134ceb
iuc
parents:
diff changeset
9 # download the data to the JWD
1416b7c401a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/metaphlan/ commit 671a5fc6d4c02bd3eb830c1886a31ecffd134ceb
iuc
parents:
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10 mpa_vJan21_TOY_CHOCOPhlAnSGB mpa_vJan21_TOY_CHOCOPhlAnSGB mpa_vJan21_TOY_CHOCOPhlAnSGB_202103 ./ SGB
1416b7c401a3 planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/metaphlan/ commit 671a5fc6d4c02bd3eb830c1886a31ecffd134ceb
iuc
parents:
diff changeset
11 # mpa_vJun23_CHOCOPhlAnSGB_202403 mpa_vJun23_CHOCOPhlAnSGB_202403 mpa_vJun23_CHOCOPhlAnSGB_202403 ${__HERE__}/mpa_vJun23_CHOCOPhlAnSGB_202403/ SGB