Mercurial > repos > iuc > meryl_filter_kmers
diff filter-kmers.xml @ 1:4f5b7b30ed7d draft default tip
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/main/tools/meryl commit 6935ad9dddbbb913817552d682d0b2208481dc7f
| author | iuc |
|---|---|
| date | Sun, 09 Nov 2025 18:34:21 +0000 |
| parents | 956142499a02 |
| children |
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--- a/filter-kmers.xml Tue Oct 08 16:43:18 2024 +0000 +++ b/filter-kmers.xml Sun Nov 09 18:34:21 2025 +0000 @@ -19,7 +19,7 @@ #if $filter_type.type == 'times' $filter_type.N #elif $filter_type.type == 'frequency' - distinct=${operation_type.filter_type.distinct} + distinct=$filter_type.distinct #end if tmp.meryl output read-db.meryl && @@ -52,6 +52,7 @@ <tests> <test expect_num_outputs="1"> <conditional name="filter_type"> + <param name="type" value="times"/> <param name="N" value="100"/> </conditional> <param name="input_meryldb_02" value="read-db.meryldb" ftype="meryldb"/> @@ -65,6 +66,7 @@ </test> <test expect_num_outputs="1"> <conditional name="filter_type"> + <param name="type" value="times"/> <param name="N" value="80"/> </conditional> <param name="input_meryldb_02" value="read-db.meryldb" ftype="meryldb"/> @@ -78,6 +80,7 @@ </test> <test expect_num_outputs="1"> <conditional name="filter_type"> + <param name="type" value="frequency"/> <param name="distinct" value="0.9998"/> </conditional> <param name="input_meryldb_02" value="maternal.meryldb" ftype="meryldb"/> @@ -91,6 +94,7 @@ </test> <test expect_num_outputs="1"> <conditional name="filter_type"> + <param name="type" value="times"/> <param name="N" value="100"/> </conditional> <param name="input_meryldb_02" value="read-db.meryldb" ftype="meryldb"/> @@ -104,6 +108,7 @@ </test> <test expect_num_outputs="1"> <conditional name="filter_type"> + <param name="type" value="times"/> <param name="N" value="100"/> </conditional> <param name="input_meryldb_02" value="read-db.meryldb" ftype="meryldb"/>