Mercurial > repos > iuc > medaka_variant

comparison variant.xml @ 9:dbef8b38161e draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/medaka commit 2a29f6676b1bbf42e9c4c3edeb4471a0ac57fbe3"
author iuc
date Mon, 29 Mar 2021 20:03:01 +0000
parents 849aebec0dd9
children 8ee6b81b7de9
comparison
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8:849aebec0dd9 9:dbef8b38161e
1 <?xml version="1.0"?> 1 <?xml version="1.0"?>
2 <tool id="medaka_variant" name="medaka variant tool" version="@TOOL_VERSION@+galaxy6" profile="@PROFILE@"> 2 <tool id="medaka_variant" name="medaka variant tool" version="@TOOL_VERSION@+galaxy7" profile="@PROFILE@">
3 <description>Probability decoding</description> 3 <description>Probability decoding</description>
4 <macros> 4 <macros>
5 <import>macros.xml</import> 5 <import>macros.xml</import>
6 </macros> 6 </macros>
7 <expand macro="requirements"> 7 <expand macro="requirements">
164 <param name="pool_mode" value="No"/> 164 <param name="pool_mode" value="No"/>
165 <param name="input" value="medaka_test.hdf"/> 165 <param name="input" value="medaka_test.hdf"/>
166 </conditional> 166 </conditional>
167 <conditional name="reference_source"> 167 <conditional name="reference_source">
168 <param name="reference_source_selector" value="history"/> 168 <param name="reference_source_selector" value="history"/>
169 <param name="ref_file" value="ref.fasta"/> 169 <param name="ref_file" value="ref.fasta.gz" ftype="fasta.gz"/>
170 </conditional> 170 </conditional>
171 <conditional name="output_annotated"> 171 <conditional name="output_annotated">
172 <param name="output_annotated_select" value="true"/> 172 <param name="output_annotated_select" value="true"/>
173 <param name="in_bam" value="medaka_test.bam"/> 173 <param name="in_bam" value="medaka_test.bam"/>
174 </conditional> 174 </conditional>