Mercurial > repos > iuc > medaka_consensus

diff consensus.xml @ 4:dfa0d4968d18 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/medaka commit e80b649094384fc6d7a8f917300db3550cc99a44"
author iuc
date Tue, 01 Sep 2020 07:04:43 +0000
parents eeb7fe9d1583
children 5acc1bfac3ab
line wrap: on
line diff
--- a/consensus.xml	Thu Jun 18 09:05:53 2020 +0000
+++ b/consensus.xml	Tue Sep 01 07:04:43 2020 +0000
@@ -1,4 +1,4 @@
-<tool id="medaka_consensus" name="medaka: Consensus" version="@TOOL_VERSION@+galaxy1" profile="@PROFILE@">
+<tool id="medaka_consensus" name="medaka: Consensus" version="@TOOL_VERSION@+galaxy2" profile="@PROFILE@">
     <description>Assembly polishing via neural networks</description>
     <macros>
         <import>macros.xml</import>
@@ -44,7 +44,7 @@
 alignment.bam ## bam
 '$out_result' ## output
 
-|& tee '$out_log'
+2>&1 | tee '$out_log'
     ]]></command>
     <inputs>
         <param argument="bam" type="data" format="bam" label="Select input alignment"/>