Mercurial > repos > iuc > malt_run

view macros.xml @ 0:0f45b98a5a08 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/malt commit 04aaa266f5b2e557f42c7feca4e081c7e9c1dae6"
author iuc
date Fri, 12 Nov 2021 18:38:49 +0000
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children d9b0eda57c0b
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<macros>
    <token name="@TOOL_VERSION@">0.5.3</token>
    <token name="@VERSION_SUFFIX@">0</token>
    <token name="@PROFILE@">20.09</token>
    <xml name="requirements">
        <requirements>
            <requirement type="package" version="0.53">malt</requirement>
        </requirements>
    </xml>
    <macro name="sub_matrix">
        <param name="sub_matrix" type="select" label="Select the protein substitution matrix to use">
            <option value="BLOSUM62" selected="True">BLOSUM62</option>
            <option value="BLOSUM45">BLOSUM45</option>
            <option value="BLOSUM50">BLOSUM50</option>
            <option value="BLOSUM80">BLOSUM80</option>
            <option value="BLOSUM90">BLOSUM90</option>
        </param>
    </macro>
    <macro name="forward_reverse_only">
        <param name="forward_only" type="boolean" truevalue="--forwardOnly" falsevalue="" checked="false" label="Align query forward strand only?"/>
        <param name="reverse_only" type="boolean" truevalue="--reverseOnly" falsevalue="" checked="false" label="Align query reverse strand only?"/>
    </macro>
    <xml name="citations">
        <citations>
            <citation type="doi">https://doi.org/10.1101/050559</citation>
        </citations>
    </xml>
</macros>